RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 ST7LQ8TDW4 575 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 PPP1R14BQ96C90 147 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 TPD52L3Q96J77 140 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 OR2V2Q96R30 315 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 TMEM246Q9BRR3 403 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 TOR3AQ9H497 397 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 REEP1Q9H902 201 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 ELOVL3Q9HB03 270 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 PALMDQ9NP74 551 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 NDRG4Q9ULP0 352 aaKnown RBP4.83□□□□□ -1.64
USP3-215ENST00000559771 PPP1R3CQ9UQK1 317 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 TPRKBQ9Y3C4 175 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 PCDHGB5Q9Y5G0 923 aa4.83□□□□□ -1.64
USP3-215ENST00000559771 IGHV2-70DA0A0C4DH43 119 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 TEX13CA0A0J9YWL9 993 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 KIR2DS1A0A191URI9 304 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 PRSS37A4D1T9 235 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 C12orf71A8MTZ7 269 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 EFCAB9A8MZ26 197 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 C22orf46C9J442 243 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 F5H5P2 479 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 TNFRSF13BO14836 293 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 RER1O15258 196 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SGCEO43556 437 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 FSTL3O95633 263 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 CYB5R3P00387 301 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 CD14P08571 375 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 NR2C1P13056 603 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 ANXA8P13928 327 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 RAC2P15153 192 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 PI3P19957 117 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 GSTM3P21266 225 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 TUBG1P23258 451 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 OMGP23515 440 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 EEF1B2P24534 225 aaKnown RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 CDKN2AP42771 156 aaKnown RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 HTR5AP47898 357 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SLC9A3P48764 834 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 LSM6P62312 80 aaKnown RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 SCRN3Q0VDG4 424 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 MAB21L1Q13394 359 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 AQP6Q13520 282 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 MEP1BQ16820 701 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 ZNF181Q2M3W8 571 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 DEFB112Q30KQ8 113 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 ZNF404Q494X3 552 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 ANKDD1AQ495B1 522 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 LRRC23Q53EV4 343 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 ZMAT1Q5H9K5 638 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 FAHD1Q6P587 224 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 LYPD2Q6UXB3 125 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 UNQ6126/PRO20091Q6UXV3 157 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 BRD3OSQ6XYD6 125 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 COLCA1Q6ZS62 124 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 KCTD8Q6ZWB6 473 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 MBOAT2Q6ZWT7 520 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 RHOUQ7L0Q8 258 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 ZER1Q7Z7L7 766 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 OAFQ86UD1 273 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 NAA40Q86UY6 237 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 KLBQ86Z14 1044 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 OR5AS1Q8N127 324 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 OR8G5Q8NG78 346 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 OR52E2Q8NGJ4 325 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 OR13F1Q8NGS4 319 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 OR1F12Q8NHA8 337 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 FNDC8Q8TC99 324 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SLC7A13Q8TCU3 470 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 RAB40AQ8WXH6 277 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 ACOT11Q8WXI4 607 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 FCGR1BQ92637 280 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 PTP4A1Q93096 173 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 TMIGD2Q96BF3 282 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 ISOC1Q96CN7 298 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 RASD2Q96D21 266 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 TSSK2Q96PF2 358 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 GPX7Q96SL4 187 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 GPA33Q99795 319 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SLC30A2Q9BRI3 323 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 FUZQ9BT04 418 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 WACQ9BTA9 647 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 CDADC1Q9BWV3 514 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SSBP3Q9BWW4 388 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 SLITRK2Q9H156 845 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SYT4Q9H2B2 425 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 ZMAT3Q9HA38 289 aaKnown RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 NRIP3Q9NQ35 241 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 TUBG2Q9NRH3 451 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SCN3BQ9NY72 215 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 PTTG3PQ9NZH4 202 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 VSX1Q9NZR4 365 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 PDP1Q9P0J1 537 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 ASH2LQ9UBL3 628 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SIGLEC7Q9Y286 467 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 COA3Q9Y2R0 106 aaPredicted RBP4.82□□□□□ -1.64
USP3-215ENST00000559771 MMP24Q9Y5R2 645 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 SNX5Q9Y5X3 404 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 LHFPL6Q9Y693 200 aa4.82□□□□□ -1.64
USP3-215ENST00000559771 DOCK11Q5JSL3 2073 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms