RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 NICN1Q9BSH3 213 aa2.57□□□□□ -2
SPG11-218ENST00000559754 RSG1Q9BU20 258 aa2.57□□□□□ -2
SPG11-218ENST00000559754 PAXXQ9BUH6 204 aa2.57□□□□□ -2
SPG11-218ENST00000559754 BEX2Q9BXY8 128 aa2.57□□□□□ -2
SPG11-218ENST00000559754 OR11A1Q9GZK7 315 aa2.57□□□□□ -2
SPG11-218ENST00000559754 NSRP1Q9H0G5 558 aaKnown RBP2.57□□□□□ -2
SPG11-218ENST00000559754 PRORYQ9H606 182 aa2.57□□□□□ -2
SPG11-218ENST00000559754 ISYNA1Q9NPH2 558 aa2.57□□□□□ -2
SPG11-218ENST00000559754 ACOT13Q9NPJ3 140 aa2.57□□□□□ -2
SPG11-218ENST00000559754 CCL28Q9NRJ3 127 aa2.57□□□□□ -2
SPG11-218ENST00000559754 IL17CQ9P0M4 197 aa2.57□□□□□ -2
SPG11-218ENST00000559754 CLEC4EQ9ULY5 219 aa2.57□□□□□ -2
SPG11-218ENST00000559754 AP3M1Q9Y2T2 418 aa2.57□□□□□ -2
SPG11-218ENST00000559754 NEUROG3Q9Y4Z2 214 aa2.57□□□□□ -2
SPG11-218ENST00000559754 MTCL1Q9Y4B5 1905 aaKnown RBP2.57□□□□□ -2
SPG11-218ENST00000559754 NUP153P49790 1475 aaKnown RBP2.57□□□□□ -2
SPG11-218ENST00000559754 IGHV3OR16-9A0A0B4J2B5 98 aa2.56□□□□□ -2
SPG11-218ENST00000559754 A0A0G2JN53 185 aa2.56□□□□□ -2
SPG11-218ENST00000559754 GOLGA8IPA6NC78 632 aa2.56□□□□□ -2
SPG11-218ENST00000559754 SYCE1LA8MT33 242 aa2.56□□□□□ -2
SPG11-218ENST00000559754 H7C1H1 209 aa2.56□□□□□ -2
SPG11-218ENST00000559754 M0R1B8 84 aa2.56□□□□□ -2
SPG11-218ENST00000559754 XKRYO14609 159 aa2.56□□□□□ -2
SPG11-218ENST00000559754 CTNSO60931 367 aa2.56□□□□□ -2
SPG11-218ENST00000559754 UPK1BO75841 260 aa2.56□□□□□ -2
SPG11-218ENST00000559754 CD8AP01732 235 aa2.56□□□□□ -2
SPG11-218ENST00000559754 RETP07949 1114 aa2.56□□□□□ -2
SPG11-218ENST00000559754 CHTF8P0CG12 524 aa2.56□□□□□ -2
SPG11-218ENST00000559754 CD37P11049 281 aa2.56□□□□□ -2
SPG11-218ENST00000559754 TDGF1P13385 188 aa2.56□□□□□ -2
SPG11-218ENST00000559754 S100A5P33763 92 aa2.56□□□□□ -2
SPG11-218ENST00000559754 MDH2P40926 338 aaKnown RBP2.56□□□□□ -2
SPG11-218ENST00000559754 P2RY4P51582 365 aa2.56□□□□□ -2
SPG11-218ENST00000559754 TDGF1P3P51864 188 aa2.56□□□□□ -2
SPG11-218ENST00000559754 PRR3P79522 188 aaKnown RBP2.56□□□□□ -2
SPG11-218ENST00000559754 HMGCS1Q01581 520 aa2.56□□□□□ -2
SPG11-218ENST00000559754 KDSRQ06136 332 aa2.56□□□□□ -2
SPG11-218ENST00000559754 STX4Q12846 297 aa2.56□□□□□ -2
SPG11-218ENST00000559754 ITGB3BPQ13352 177 aaPredicted RBP2.56□□□□□ -2
SPG11-218ENST00000559754 GUSBP1Q15486 140 aa2.56□□□□□ -2
SPG11-218ENST00000559754 SGCAQ16586 387 aa2.56□□□□□ -2
SPG11-218ENST00000559754 ZSCAN26Q16670 478 aa2.56□□□□□ -2
SPG11-218ENST00000559754 GSG1Q2KHT4 349 aa2.56□□□□□ -2
SPG11-218ENST00000559754 TMEM249Q2WGJ8 235 aa2.56□□□□□ -2
SPG11-218ENST00000559754 OR2T5Q6IEZ7 315 aa2.56□□□□□ -2
SPG11-218ENST00000559754 Q6ZT83 130 aa2.56□□□□□ -2
SPG11-218ENST00000559754 OR2T29Q8NH02 315 aa2.56□□□□□ -2
SPG11-218ENST00000559754 ZNF461Q8TAF7 563 aa2.56□□□□□ -2
SPG11-218ENST00000559754 FANK1Q8TC84 345 aa2.56□□□□□ -2
SPG11-218ENST00000559754 C7orf33Q8WU49 177 aa2.56□□□□□ -2
SPG11-218ENST00000559754 UCN3Q969E3 161 aa2.56□□□□□ -2
SPG11-218ENST00000559754 GALNT14Q96FL9 552 aa2.56□□□□□ -2
SPG11-218ENST00000559754 AURKBQ96GD4 344 aaPredicted RBP2.56□□□□□ -2
SPG11-218ENST00000559754 SDHCQ99643 169 aaPredicted RBP2.56□□□□□ -2
SPG11-218ENST00000559754 GABRG3Q99928 467 aa2.56□□□□□ -2
SPG11-218ENST00000559754 PDCD1LG2Q9BQ51 273 aa2.56□□□□□ -2
SPG11-218ENST00000559754 NRIP2Q9BQI9 281 aa2.56□□□□□ -2
SPG11-218ENST00000559754 GABARAPL3Q9BY60 117 aa2.56□□□□□ -2
SPG11-218ENST00000559754 OR51B5Q9H339 312 aa2.56□□□□□ -2
SPG11-218ENST00000559754 ZDHHC4Q9NPG8 344 aa2.56□□□□□ -2
SPG11-218ENST00000559754 ASCL3Q9NQ33 180 aa2.56□□□□□ -2
SPG11-218ENST00000559754 FBXO8Q9NRD0 319 aa2.56□□□□□ -2
SPG11-218ENST00000559754 NLE1Q9NVX2 485 aaPredicted RBP2.56□□□□□ -2
SPG11-218ENST00000559754 USE1Q9NZ43 259 aa2.56□□□□□ -2
SPG11-218ENST00000559754 SLC7A11Q9UPY5 501 aa2.56□□□□□ -2
SPG11-218ENST00000559754 ZNF257Q9Y2Q1 563 aa2.56□□□□□ -2
SPG11-218ENST00000559754 USH1CQ9Y6N9 552 aa2.56□□□□□ -2
SPG11-218ENST00000559754 ABCB11O95342 1321 aa2.56□□□□□ -2
SPG11-218ENST00000559754 PLB1Q6P1J6 1458 aa2.56□□□□□ -2
SPG11-218ENST00000559754 TMEM131Q92545 1883 aa2.56□□□□□ -2
SPG11-218ENST00000559754 CHD4Q14839 1912 aa2.56□□□□□ -2
SPG11-218ENST00000559754 C2orf16Q68DN1 1984 aa2.56□□□□□ -2
SPG11-218ENST00000559754 A0A1B0GX12 115 aa2.55□□□□□ -2
SPG11-218ENST00000559754 ZNF233A6NK53 670 aa2.55□□□□□ -2
SPG11-218ENST00000559754 KRTAP4-16G5E9R7 235 aaPredicted RBP2.55□□□□□ -2
SPG11-218ENST00000559754 PEX7O00628 323 aa2.55□□□□□ -2
SPG11-218ENST00000559754 ENSAO43768 121 aaKnown RBP2.55□□□□□ -2
SPG11-218ENST00000559754 TDRD6O60522 2096 aaKnown RBP2.55□□□□□ -2
SPG11-218ENST00000559754 PTTG1O95997 202 aa2.55□□□□□ -2
SPG11-218ENST00000559754 PTHP01270 115 aa2.55□□□□□ -2
SPG11-218ENST00000559754 EIF4EP06730 217 aaKnown RBP2.55□□□□□ -2
SPG11-218ENST00000559754 THRAP10827 490 aa2.55□□□□□ -2
SPG11-218ENST00000559754 ERGP11308 486 aa2.55□□□□□ -2
SPG11-218ENST00000559754 CD1EP15812 388 aa2.55□□□□□ -2
SPG11-218ENST00000559754 MYCNOSP40205 109 aa2.55□□□□□ -2
SPG11-218ENST00000559754 RIPPLY3P57055 190 aa2.55□□□□□ -2
SPG11-218ENST00000559754 PPP1CBP62140 327 aa2.55□□□□□ -2
SPG11-218ENST00000559754 SLC35A1P78382 337 aa2.55□□□□□ -2
SPG11-218ENST00000559754 ZNHIT3Q15649 155 aaPredicted RBP2.55□□□□□ -2
SPG11-218ENST00000559754 LRRC10Q5BKY1 277 aa2.55□□□□□ -2
SPG11-218ENST00000559754 COQ5Q5HYK3 327 aa2.55□□□□□ -2
SPG11-218ENST00000559754 TIMM23BQ5SRD1 257 aa2.55□□□□□ -2
SPG11-218ENST00000559754 SDHAF4Q5VUM1 108 aa2.55□□□□□ -2
SPG11-218ENST00000559754 EPGNQ6UW88 154 aa2.55□□□□□ -2
SPG11-218ENST00000559754 RALGPS2Q86X27 583 aaPredicted RBP2.55□□□□□ -2
SPG11-218ENST00000559754 ZNF677Q86XU0 584 aa2.55□□□□□ -2
SPG11-218ENST00000559754 FUNDC1Q8IVP5 155 aa2.55□□□□□ -2
SPG11-218ENST00000559754 BBS7Q8IWZ6 715 aa2.55□□□□□ -2
SPG11-218ENST00000559754 TMEM61Q8N0U2 210 aa2.55□□□□□ -2
SPG11-218ENST00000559754 CYP4Z2PQ8N1L4 340 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms