RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 ZNF570Q96NI8 536 aa8.03□□□□□ -1.12
ABCD4-227ENST00000557554 CCL13Q99616 98 aa8.03□□□□□ -1.12
ABCD4-227ENST00000557554 MCRIP2Q9BUT9 160 aaKnown RBP8.03□□□□□ -1.12
ABCD4-227ENST00000557554 RPS6KA6Q9UK32 745 aa8.03□□□□□ -1.12
ABCD4-227ENST00000557554 POLR1DQ9Y2S0 133 aa8.03□□□□□ -1.12
ABCD4-227ENST00000557554 SNX13Q9Y5W8 968 aa8.03□□□□□ -1.12
ABCD4-227ENST00000557554 LHFPL6Q9Y693 200 aa8.03□□□□□ -1.12
ABCD4-227ENST00000557554 TRBV23-1A0A0A0MS06 115 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 FAM90A8PA6NJQ4 464 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 F5H5K5 113 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 J3KTA2 159 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 M0R1W7 72 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 PEX14O75381 377 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 KHDRBS3O75525 346 aaKnown RBP8.02□□□□□ -1.13
ABCD4-227ENST00000557554 CLIC3O95833 236 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 CD14P08571 375 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 CENPAP49450 140 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 THBS3P49746 956 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 HIST1H3AP68431 136 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 PRKCDQ05655 676 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 KRR1Q13601 381 aaKnown RBP8.02□□□□□ -1.13
ABCD4-227ENST00000557554 LRRC23Q53EV4 343 aaPredicted RBP8.02□□□□□ -1.13
ABCD4-227ENST00000557554 CYBRD1Q53TN4 286 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 HIST2H3PS2Q5TEC6 136 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 NANOGP8Q6NSW7 305 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 HIST2H3AQ71DI3 136 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 DYNAPQ8N1N2 210 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 SPRYD4Q8WW59 207 aaPredicted RBP8.02□□□□□ -1.13
ABCD4-227ENST00000557554 PRRC1Q96M27 445 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 TSSK2Q96PF2 358 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 COQ7Q99807 217 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 NUAK2Q9H093 628 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 HDHD2Q9H0R4 259 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 RABEP2Q9H5N1 569 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 NMNAT1Q9HAN9 279 aaPredicted RBP8.02□□□□□ -1.13
ABCD4-227ENST00000557554 C1orf123Q9NWV4 160 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 ATPIF1Q9UII2 106 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 TCF19Q9Y242 345 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 CAPN7Q9Y6W3 813 aa8.02□□□□□ -1.13
ABCD4-227ENST00000557554 A0A087WUU8 490 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 HTR3EA5X5Y0 456 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.01□□□□□ -1.13
ABCD4-227ENST00000557554 F2RL2O00254 374 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 DCTN6O00399 190 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 SOCS2O14508 198 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 FFAR1O14842 300 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 AHCYL1O43865 530 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 GRPP07492 148 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 ACSM4P0C7M7 580 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 ANOS1P23352 680 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 KCNMB1Q16558 191 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 ZBED5Q49AG3 693 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 WDR38Q5JTN6 314 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 ATPAF1Q5TC12 328 aaPredicted RBP8.01□□□□□ -1.13
ABCD4-227ENST00000557554 C10orf99Q6UWK7 81 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 ZNF730Q6ZMV8 503 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 CFAP77Q6ZQR2 320 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 PTCHD4Q6ZW05 846 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 CROCCP2Q86T23 111 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 LINC00346Q8IVM7 164 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 C11orf53Q8IXP5 236 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 FAM216BQ8N7L0 139 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 GJC3Q8NFK1 279 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 TLCD1Q96CP7 247 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 PRR25Q96S07 402 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 ADAT1Q9BUB4 502 aaKnown RBP8.01□□□□□ -1.13
ABCD4-227ENST00000557554 FNDC11Q9BVV2 318 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 EDA2RQ9HAV5 297 aa8.01□□□□□ -1.13
ABCD4-227ENST00000557554 VSX1Q9NZR4 365 aaPredicted RBP8.01□□□□□ -1.13
ABCD4-227ENST00000557554 PLECQ15149 4684 aaKnown RBP8.01□□□□□ -1.13
ABCD4-227ENST00000557554 hCG_1807616A0A1W2PRN6 198 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 A6NLC8 198 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 GMDSO60547 372 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 IFNA14P01570 189 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 LCATP04180 440 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 MUC1P15941 1255 aaPredicted RBP8□□□□□ -1.13
ABCD4-227ENST00000557554 SDHAP31040 664 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 CDKN2AP42771 156 aaKnown RBP8□□□□□ -1.13
ABCD4-227ENST00000557554 VDAC2P45880 294 aaPredicted RBP8□□□□□ -1.13
ABCD4-227ENST00000557554 IL5RAQ01344 420 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 MALLQ13021 153 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 TRAM2Q15035 370 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 KRTAP27-1Q3LI81 207 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 ANKDD1AQ495B1 522 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 PGAP1Q75T13 922 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 MRPL21Q7Z2W9 205 aaKnown RBP8□□□□□ -1.13
ABCD4-227ENST00000557554 CENPVQ7Z7K6 275 aaPredicted RBP8□□□□□ -1.13
ABCD4-227ENST00000557554 TMEM219Q86XT9 240 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 LNX2Q8N448 690 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 C11orf42Q8N5U0 333 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 ACOT11Q8WXI4 607 aaPredicted RBP8□□□□□ -1.13
ABCD4-227ENST00000557554 SEH1LQ96EE3 360 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 PITX2Q99697 317 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 ADA2Q9NZK5 511 aa8□□□□□ -1.13
ABCD4-227ENST00000557554 CD300LBA8K4G0 201 aa7.99□□□□□ -1.13
ABCD4-227ENST00000557554 FXYD1O00168 92 aa7.99□□□□□ -1.13
ABCD4-227ENST00000557554 ACOT8O14734 319 aa7.99□□□□□ -1.13
ABCD4-227ENST00000557554 NDUFB3O43676 98 aa7.99□□□□□ -1.13
ABCD4-227ENST00000557554 SELLP14151 372 aa7.99□□□□□ -1.13
ABCD4-227ENST00000557554 IFNA8P32881 189 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms