RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.53□□□□□ -0.724e-15■■■■■ 30.4
SLIRP-209ENST00000557342 TMEM178BH3BS89 294 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 WNT9BO14905 357 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 SLC16A6O15403 523 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 ENTPD6O75354 484 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 CRLF1O75462 422 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 IGHV2-70P01814 119 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 KRT8P05787 483 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 ATP6V1B1P15313 513 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-209ENST00000557342 PCMT1P22061 227 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 GNALP38405 381 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 DVL1P1P54792 670 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-209ENST00000557342 LMO4P61968 165 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 BTG1P62324 171 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 ACTC1P68032 377 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 ACTA1P68133 377 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 MAB21L1Q13394 359 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 OR8B8Q15620 311 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 TMEM155Q4W5P6 130 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 MOGAT3Q86VF5 341 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 MUC20Q8N307 709 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-209ENST00000557342 KLHL36Q8N4N3 616 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 PACRGLQ8N7B6 248 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 OR10H4Q8NGA5 316 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 OR8S1Q8NH09 359 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF420Q8TAQ5 688 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-209ENST00000557342 Q8TCH9 128 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 UBE2FQ969M7 185 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 Q96MT0 163 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 SIGLEC11Q96RL6 698 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 MYCBPQ99417 103 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-209ENST00000557342 TBX5Q99593 518 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 SOX7Q9BT81 388 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 TTTY10Q9BZA0 68 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 PBOV1Q9GZY1 135 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 ZNF665Q9H7R5 613 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 FN3KRPQ9HA64 309 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 LPAR3Q9UBY5 353 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 NUFIP1Q9UHK0 495 aaKnown RBP10.53□□□□□ -0.72
SLIRP-209ENST00000557342 PCDHGB1Q9Y5G3 927 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 R4GMQ9 66 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 CSPG4Q6UVK1 2322 aa10.53□□□□□ -0.72
SLIRP-209ENST00000557342 A0A1W2PQL4 384 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-209ENST00000557342 ANXA2P2A6NMY6 339 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 PRR32B1ATL7 298 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 LOC110117498-PIK3R3F6TDL0 507 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 SULT1C4O75897 302 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 FSTL3O95633 263 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 PTBP3O95758 552 aaKnown RBP10.52□□□□□ -0.73
SLIRP-209ENST00000557342 IGHV2-5P01817 119 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 MDH2P40926 338 aaKnown RBP10.52□□□□□ -0.73
SLIRP-209ENST00000557342 MAP2K3P46734 347 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 PLEKHG7Q6ZR37 379 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 GLCCI1Q86VQ1 547 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 LRRC28Q86X40 367 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-209ENST00000557342 COMMD2Q86X83 199 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 GALNT4Q8N4A0 578 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 RFLNBQ8N5W9 214 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 YIPF7Q8N8F6 280 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 OR51F2Q8NH61 342 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 RNFT2Q96EX2 444 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 POM121Q96HA1 1249 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 LYZL4Q96KX0 146 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 PAPOLGQ9BWT3 736 aaKnown RBP10.52□□□□□ -0.73
SLIRP-209ENST00000557342 DCAF16Q9NXF7 216 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 MRM2Q9UI43 246 aaKnown RBP10.52□□□□□ -0.73
SLIRP-209ENST00000557342 CDC42EP3Q9UKI2 254 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 PCDHB10Q9UN67 800 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 MPC1Q9Y5U8 109 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 SNX5Q9Y5X3 404 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 ABCA2Q9BZC7 2435 aa10.52□□□□□ -0.73
SLIRP-209ENST00000557342 METTL15A6NJ78 407 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 FAM157AC9JC47 383 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 SRSF10O75494 262 aaKnown RBP10.51□□□□□ -0.73
SLIRP-209ENST00000557342 MTRF1O75570 445 aaKnown RBP10.51□□□□□ -0.73
SLIRP-209ENST00000557342 APOL3O95236 402 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 CYB5R3P00387 301 aaPredicted RBP10.51□□□□□ -0.73
SLIRP-209ENST00000557342 CST4P01036 141 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 MSMBP08118 114 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 GABRB1P18505 474 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 HNF1AP20823 631 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 CPT2P23786 658 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 IL5RAQ01344 420 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 SLC34A1Q06495 639 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 LRRC36Q1X8D7 754 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 CHRFAM7AQ494W8 412 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 BCL2L15Q5TBC7 163 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 ZBTB37Q5TC79 503 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 PRAMEF6Q5VXH4 476 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 TTC23Q5W5X9 447 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 SSX6Q7RTT6 188 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 FAM220AQ7Z4H9 259 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 ENTHD1Q8IYW4 607 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 RHOXF1Q8NHV9 184 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 MRPL48Q96GC5 212 aaKnown RBP10.51□□□□□ -0.73
SLIRP-209ENST00000557342 MICU1Q9BPX6 476 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 SHARPINQ9H0F6 387 aa10.51□□□□□ -0.73
SLIRP-209ENST00000557342 UFSP2Q9NUQ7 469 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms