RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PLTPP55058 493 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 CAV3P56539 151 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 HOXA4Q00056 320 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 CAV1Q03135 178 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 MFGE8Q08431 387 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 HAGHQ16775 308 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 RNLSQ5VYX0 342 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 OR4F3Q6IEY1 312 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 C16orf89Q6UX73 402 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 C18orf65Q6ZTR6 163 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 CPLX4Q7Z7G2 160 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 LHFPL4Q7Z7J7 247 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 ZNF329Q86UD4 541 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 RANBP3LQ86VV4 465 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 LYPD6Q86Y78 171 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 MKXQ8IYA7 352 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 FGFRL1Q8N441 504 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 GCSAMQ8N6F7 178 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 FAM216BQ8N7L0 139 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 MNS1Q8NEH6 495 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 SPATA4Q8NEY3 305 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 FBXO25Q8TCJ0 367 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 SPRYD4Q8WW59 207 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 STMN2Q93045 179 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 SLC35A5Q9BS91 424 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 TMEM43Q9BTV4 400 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 DNTTIP1Q9H147 329 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 RNPEPL1Q9HAU8 725 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 EMC7Q9NPA0 242 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 C14orf119Q9NWQ9 140 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 CHCHD3Q9NX63 227 aaKnown RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 TMEM216Q9P0N5 145 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 P2RX2Q9UBL9 471 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 SLC25A10Q9UBX3 287 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-245ENST00000556958 UGT2A1Q9Y4X1 527 aa4.51□□□□□ -1.69
ATXN3-245ENST00000556958 DMBT1Q9UGM3 2413 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-245ENST00000556958 IGHV3OR15-7A0A075B7D8 119 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 CXorf65A6NEN9 183 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 FAM90A22PA8MWA6 464 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 LRRN3E7EW58 273 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 GRPP07492 148 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 SPNP16150 400 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 MSR1P21757 451 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 COX7A1P24310 79 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 CDX1P47902 265 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-245ENST00000556958 POU3F4P49335 361 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 SLC25A1P53007 311 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 CLDN8P56748 225 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 NCALDP61601 193 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 SLC34A1Q06495 639 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 CD47Q08722 323 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 MALLQ13021 153 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 MAD2L1Q13257 205 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-245ENST00000556958 FHL3Q13643 280 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 KRT72Q14CN4 511 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 SRSF7Q16629 238 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATXN3-245ENST00000556958 UGT3A2Q3SY77 523 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 C9orf152Q5JTZ5 239 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 C8orf74Q6P047 294 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 C10orf107Q8IVU9 208 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 FAM71E2Q8N5Q1 922 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 FNDC5Q8NAU1 212 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 OR8J2Q8NGG1 315 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 OR6Q1Q8NGQ2 317 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 OR13D1Q8NGV5 346 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 OR5K1Q8NHB7 308 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 TSEN15Q8WW01 171 aaKnown RBP4.5□□□□□ -1.69
ATXN3-245ENST00000556958 ERP44Q9BS26 406 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 RAB17Q9H0T7 212 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 GHITMQ9H3K2 345 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 TUBB1Q9H4B7 451 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 THUMPD1Q9NXG2 353 aaKnown RBP4.5□□□□□ -1.69
ATXN3-245ENST00000556958 ATPIF1Q9UII2 106 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATXN3-245ENST00000556958 NDUFAF1Q9Y375 327 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 FIS1Q9Y3D6 152 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 LRP12Q9Y561 859 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 DNAJC15Q9Y5T4 150 aa4.5□□□□□ -1.69
ATXN3-245ENST00000556958 OR6C6A6NF89 314 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 BLOC1S5-TXNDC5H3BN57 136 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 M0R3H8 397 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 CCRL2O00421 344 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 ACOT8O14734 319 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 RRP9O43818 475 aaKnown RBP4.49□□□□□ -1.69
ATXN3-245ENST00000556958 KRT75O95678 551 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 CH25HO95992 272 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 ARG1P05089 322 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 DUX4L4P0CJ87 422 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 MYL2P10916 166 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 UMPSP11172 480 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 CA6P23280 308 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 SDHAP31040 664 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 BRS3P32247 399 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 ARHGDIBP52566 201 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 DNAJB13P59910 316 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 SPIBQ01892 262 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 IL18R1Q13478 541 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 RBMY1FQ15415 496 aaKnown RBP4.49□□□□□ -1.69
ATXN3-245ENST00000556958 PCK2Q16822 640 aa4.49□□□□□ -1.69
ATXN3-245ENST00000556958 WHAMMP3Q1A5X7 153 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms