RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 DUSP15Q9H1R2 295 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 FGF21Q9NSA1 209 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 FARSAQ9Y285 508 aaKnown RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 CSAG2Q9Y5P2 127 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 TMED7-TICAM2A0A0A6YYA0 188 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 A0A1B0GX78 115 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 METTL21EPA6NDL7 271 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 EEF1E1-BLOC1S5C9J1V9 151 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 RENP00797 406 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 CD5P06127 495 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 CRHP06850 196 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 OR8U8P0C7N1 319 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 INSM1Q01101 510 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 FOXO1Q12778 655 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF239Q16600 458 aaKnown RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 OR52W1Q6IF63 320 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 SLC35D2Q76EJ3 337 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 OR13C8Q8NGS7 320 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF519Q8TB69 540 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 THRSPQ92748 146 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 FBXO17Q96EF6 278 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 MEGF10Q96KG7 1140 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 TAAR9Q96RI9 348 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 INTS14Q96SY0 518 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 PRRT1Q99946 306 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 SULT4A1Q9BR01 284 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 PCED1AQ9H1Q7 454 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 RPS10P5Q9NQ39 176 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 C19orf12Q9NSK7 152 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 MRPL22Q9NWU5 206 aaKnown RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 B9D1Q9UPM9 204 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 TMED7Q9Y3B3 224 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 POMT1Q9Y6A1 747 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 WDFY3Q8IZQ1 3526 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 C5orf51A6NDU8 294 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 TMEM212A6NML5 194 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 SLC17A2O00624 439 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 KCNAB3O43448 404 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 CD2P06729 351 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 GP1BBP13224 206 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 NQO2P16083 231 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 GLB1P16278 677 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 PGCP20142 388 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 AVPR2P30518 371 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 GLP1RP43220 463 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 PPP1R1AQ13522 171 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 AKIRIN2Q53H80 203 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 EIF5AL1Q6IS14 154 aaKnown RBP10.89□□□□□ -0.67
SHMT2-207ENST00000553837 FAHD2BQ6P2I3 314 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-207ENST00000553837 ZNF574Q6ZN55 896 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-207ENST00000553837 ZNF627Q7L945 461 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 SLC29A4Q7RTT9 530 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 KDM8Q8N371 416 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 MCHR2Q969V1 340 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 FAHD2AQ96GK7 314 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 SLC6A7Q99884 636 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 UNKLQ9H9P5 680 aaKnown RBP10.89□□□□□ -0.67
SHMT2-207ENST00000553837 FAM86C1Q9NVL1 165 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 CACFD1Q9UGQ2 172 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 VSIG4Q9Y279 399 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 TIMM10BQ9Y5J6 103 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 KPTNQ9Y664 436 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 ALOX12BO75342 701 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 CRTAPO75718 401 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-207ENST00000553837 TIAF1O95411 115 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 PNPP00491 289 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 MBP02144 154 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 CRYABP02511 175 aaKnown RBP10.89□□□□□ -0.67
SHMT2-207ENST00000553837 ITGA5P08648 1049 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 HLA-DOBP13765 273 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 CTLA4P16410 223 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 RAB5AP20339 215 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 SLC6A9P48067 706 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 EIF5AP63241 154 aaKnown RBP10.89□□□□□ -0.67
SHMT2-207ENST00000553837 ADAM8P78325 824 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 SGCBQ16585 318 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 MEP1BQ16820 701 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 WDR38Q5JTN6 314 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 ASPHD2Q6ICH7 369 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 KCTD9Q7L273 389 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 MDGA2Q7Z553 956 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 ZDHHC22Q8N966 263 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 OTOSQ8NHW6 89 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 DNASE2BQ8WZ79 361 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 RAB3CQ96E17 227 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 NKX3-1Q99801 234 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-207ENST00000553837 SOX7Q9BT81 388 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 NMES1Q9C002 83 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 SLC2A8Q9NY64 477 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 COPS7AQ9UBW8 275 aa10.89□□□□□ -0.67
SHMT2-207ENST00000553837 IGLV1-36A0A0B4J1U3 117 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 C13orf42A0A1B0GVH6 325 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 PRSS37A4D1T9 235 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 SOX1O00570 391 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 BCAT2O15382 392 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 PPIHO43447 177 aaKnown RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 FBXO24O75426 580 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 DXOO77932 396 aaKnown RBP10.88□□□□□ -0.67
SHMT2-207ENST00000553837 RD3LP0DJH9 198 aa10.88□□□□□ -0.67
SHMT2-207ENST00000553837 CEACAM6P40199 344 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms