RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 PTTG3PQ9NZH4 202 aa4.27□□□□□ -1.73
APP-217ENST00000548570 RHBDD3Q9Y3P4 386 aa4.27□□□□□ -1.73
APP-217ENST00000548570 N6AMT1Q9Y5N5 214 aa4.27□□□□□ -1.73
APP-217ENST00000548570 SNX5Q9Y5X3 404 aa4.27□□□□□ -1.73
APP-217ENST00000548570 V9GYS6 101 aa4.27□□□□□ -1.73
APP-217ENST00000548570 HIVEP3Q5T1R4 2406 aa4.27□□□□□ -1.73
APP-217ENST00000548570 CSMD1Q96PZ7 3565 aa4.27□□□□□ -1.73
APP-217ENST00000548570 USP9YO00507 2555 aaPredicted RBP4.27□□□□□ -1.73
APP-217ENST00000548570 ALPK2Q86TB3 2170 aa4.27□□□□□ -1.73
APP-217ENST00000548570 MED12LQ86YW9 2145 aa4.27□□□□□ -1.73
APP-217ENST00000548570 PHF3Q92576 2039 aaKnown RBP4.26□□□□□ -1.73
APP-217ENST00000548570 LRRK2Q5S007 2527 aa4.26□□□□□ -1.73
APP-217ENST00000548570 IGKV1-9A0A0C4DH69 117 aa4.26□□□□□ -1.73
APP-217ENST00000548570 TRBV5-5A0A0J9YX44 114 aa4.26□□□□□ -1.73
APP-217ENST00000548570 A0A0U1RQV5 110 aa4.26□□□□□ -1.73
APP-217ENST00000548570 LOC107986453A0A1B0GWG9 222 aa4.26□□□□□ -1.73
APP-217ENST00000548570 SHISA3A0PJX4 238 aa4.26□□□□□ -1.73
APP-217ENST00000548570 IRGMA1A4Y4 181 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ANKRD61A6NGH8 418 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ACOD1A6NK06 481 aa4.26□□□□□ -1.73
APP-217ENST00000548570 CD300LBA8K4G0 201 aa4.26□□□□□ -1.73
APP-217ENST00000548570 LOC110117498-PIK3R3F6TDL0 507 aa4.26□□□□□ -1.73
APP-217ENST00000548570 H0YL77 283 aa4.26□□□□□ -1.73
APP-217ENST00000548570 J3QW42 95 aa4.26□□□□□ -1.73
APP-217ENST00000548570 OVOL3O00110 214 aa4.26□□□□□ -1.73
APP-217ENST00000548570 HS3ST1O14792 307 aa4.26□□□□□ -1.73
APP-217ENST00000548570 CASKO14936 926 aa4.26□□□□□ -1.73
APP-217ENST00000548570 MLNRO43193 412 aa4.26□□□□□ -1.73
APP-217ENST00000548570 PLPP2O43688 288 aa4.26□□□□□ -1.73
APP-217ENST00000548570 MRPS14O60783 128 aaKnown RBP4.26□□□□□ -1.73
APP-217ENST00000548570 TNFAIP8O95379 198 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ANXA2P07355 339 aaKnown RBP4.26□□□□□ -1.73
APP-217ENST00000548570 SELEP16581 610 aa4.26□□□□□ -1.73
APP-217ENST00000548570 JUNBP17275 347 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 MYL12AP19105 171 aa4.26□□□□□ -1.73
APP-217ENST00000548570 KITLGP21583 273 aa4.26□□□□□ -1.73
APP-217ENST00000548570 EEF1B2P24534 225 aaKnown RBP4.26□□□□□ -1.73
APP-217ENST00000548570 HSD11B1P28845 292 aa4.26□□□□□ -1.73
APP-217ENST00000548570 TTKP33981 857 aa4.26□□□□□ -1.73
APP-217ENST00000548570 SERPINF1P36955 418 aa4.26□□□□□ -1.73
APP-217ENST00000548570 PMELP40967 661 aa4.26□□□□□ -1.73
APP-217ENST00000548570 RAD52P43351 418 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ALDH3B1P43353 468 aa4.26□□□□□ -1.73
APP-217ENST00000548570 SLC6A9P48067 706 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ALDH3B2P48448 385 aa4.26□□□□□ -1.73
APP-217ENST00000548570 RGS6P49758 472 aa4.26□□□□□ -1.73
APP-217ENST00000548570 NR1H2P55055 460 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ACTA2P62736 377 aa4.26□□□□□ -1.73
APP-217ENST00000548570 RPS25P62851 125 aaKnown RBP4.26□□□□□ -1.73
APP-217ENST00000548570 ACTG2P63267 376 aa4.26□□□□□ -1.73
APP-217ENST00000548570 HOXA4Q00056 320 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 BDH1Q02338 343 aa4.26□□□□□ -1.73
APP-217ENST00000548570 MLLT11Q13015 90 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 TAF13Q15543 124 aa4.26□□□□□ -1.73
APP-217ENST00000548570 OR8B8Q15620 311 aa4.26□□□□□ -1.73
APP-217ENST00000548570 EFNB3Q15768 340 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ODF4Q2M2E3 257 aa4.26□□□□□ -1.73
APP-217ENST00000548570 CCDC58Q4VC31 144 aa4.26□□□□□ -1.73
APP-217ENST00000548570 FAM27D1Q5T7N8 215 aa4.26□□□□□ -1.73
APP-217ENST00000548570 SYT6Q5T7P8 510 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 BCL2L15Q5TBC7 163 aa4.26□□□□□ -1.73
APP-217ENST00000548570 TMEM42Q69YG0 159 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ZNF529Q6P280 563 aa4.26□□□□□ -1.73
APP-217ENST00000548570 RPL22L1Q6P5R6 122 aaKnown RBP4.26□□□□□ -1.73
APP-217ENST00000548570 UNQ9370/PRO34162Q6UXP9 181 aa4.26□□□□□ -1.73
APP-217ENST00000548570 TMEM91Q6ZNR0 172 aa4.26□□□□□ -1.73
APP-217ENST00000548570 KCTD8Q6ZWB6 473 aa4.26□□□□□ -1.73
APP-217ENST00000548570 DTX2Q86UW9 622 aa4.26□□□□□ -1.73
APP-217ENST00000548570 LYPD6Q86Y78 171 aa4.26□□□□□ -1.73
APP-217ENST00000548570 TGIF2LYQ8IUE0 185 aa4.26□□□□□ -1.73
APP-217ENST00000548570 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 PHC2Q8IXK0 858 aa4.26□□□□□ -1.73
APP-217ENST00000548570 OR5AS1Q8N127 324 aa4.26□□□□□ -1.73
APP-217ENST00000548570 CELF2-AS1Q8N7Q2 184 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ZNF611Q8N823 705 aa4.26□□□□□ -1.73
APP-217ENST00000548570 OR56B2PQ8NGI1 322 aa4.26□□□□□ -1.73
APP-217ENST00000548570 UBASH3BQ8TF42 649 aa4.26□□□□□ -1.73
APP-217ENST00000548570 HPSE2Q8WWQ2 592 aa4.26□□□□□ -1.73
APP-217ENST00000548570 DVL3Q92997 716 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 SMIM19Q96E16 107 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ADAT3Q96EY9 351 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 REEP6Q96HR9 211 aa4.26□□□□□ -1.73
APP-217ENST00000548570 PGAM5Q96HS1 289 aa4.26□□□□□ -1.73
APP-217ENST00000548570 EAF1Q96JC9 268 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 FAM71F1Q96KD3 344 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 MGLLQ99685 303 aa4.26□□□□□ -1.73
APP-217ENST00000548570 SYT3Q9BQG1 590 aa4.26□□□□□ -1.73
APP-217ENST00000548570 SLC30A2Q9BRI3 323 aa4.26□□□□□ -1.73
APP-217ENST00000548570 TRAF4Q9BUZ4 470 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 BCL2L14Q9BZR8 327 aa4.26□□□□□ -1.73
APP-217ENST00000548570 OR10A2Q9H208 303 aa4.26□□□□□ -1.73
APP-217ENST00000548570 CLEC4MQ9H2X3 399 aaPredicted RBP4.26□□□□□ -1.73
APP-217ENST00000548570 PLK3Q9H4B4 646 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ISYNA1Q9NPH2 558 aa4.26□□□□□ -1.73
APP-217ENST00000548570 PURGQ9UJV8 347 aaKnown RBP4.26□□□□□ -1.73
APP-217ENST00000548570 BLOC1S6Q9UL45 172 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ERGIC3Q9Y282 383 aa4.26□□□□□ -1.73
APP-217ENST00000548570 ATP23Q9Y6H3 246 aa4.26□□□□□ -1.73
APP-217ENST00000548570 SVILO95425 2214 aa4.26□□□□□ -1.73
APP-217ENST00000548570 CRYBG3Q68DQ2 2970 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms