RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CD8AP01732 235 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 GSTP1P09211 210 aaKnown RBP13.66□□□□□ -0.22
BRF1-212ENST00000547562 LIPCP11150 499 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 ZBTB25P24278 435 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 PLAC9Q5JTB6 97 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 LYG2Q86SG7 212 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 LRRC18Q8N456 261 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 RAB3CQ96E17 227 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 GPER1Q99527 375 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 PIGQQ9BRB3 760 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 CST11Q9H112 138 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 BANF2Q9H503 90 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 ZNF230Q9UIE0 474 aaPredicted RBP13.66□□□□□ -0.22
BRF1-212ENST00000547562 FOXD3Q9UJU5 478 aaPredicted RBP13.66□□□□□ -0.22
BRF1-212ENST00000547562 NCKAP5O14513 1909 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 ZDBF2Q9HCK1 2354 aa13.66□□□□□ -0.22
BRF1-212ENST00000547562 OR5H15A6NDH6 313 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 OR2AT4A6NND4 320 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 F5H5K5 113 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 SOCS1O15524 211 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 UBBP0CG47 229 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 HIST1H1DP16402 221 aaKnown RBP13.65□□□□□ -0.22
BRF1-212ENST00000547562 POU3F2P20265 443 aaPredicted RBP13.65□□□□□ -0.22
BRF1-212ENST00000547562 SLC6A9P48067 706 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 HIST1H3AP68431 136 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 SRSF4Q08170 494 aaKnown RBP13.65□□□□□ -0.22
BRF1-212ENST00000547562 ECH1Q13011 328 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 AANATQ16613 207 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 HIST2H3PS2Q5TEC6 136 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 GSG1LQ6UXU4 331 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 HIST2H3AQ71DI3 136 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 NAXDQ8IW45 347 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 BEST3Q8N1M1 668 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 ZIC4Q8N9L1 334 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 RBM24Q9BX46 236 aaKnown RBP13.65□□□□□ -0.22
BRF1-212ENST00000547562 MFFQ9GZY8 342 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 A0A0U1RQV5 110 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 A0A1W2PP11 408 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 CRYZL1O95825 349 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 IL2RAP01589 272 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 SUCLG1P53597 346 aaKnown RBP13.65□□□□□ -0.22
BRF1-212ENST00000547562 ARPC4P59998 168 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 EIF3IQ13347 325 aaKnown RBP13.65□□□□□ -0.22
BRF1-212ENST00000547562 PPP1R1AQ13522 171 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 FAM189A2Q15884 450 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 SLC23A3Q6PIS1 610 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 SGCZQ96LD1 299 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 SRXN1Q9BYN0 137 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 ANAPC10Q9UM13 185 aa13.65□□□□□ -0.22
BRF1-212ENST00000547562 GJE1A6NN92 205 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 CRTAPO75718 401 aaPredicted RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 PMP2P02689 132 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 IFNA6P05013 189 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 PRF1P14222 555 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 TMEM50BP56557 158 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 FGL1Q08830 312 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 RSPO1Q2MKA7 263 aaPredicted RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 LIN54Q6MZP7 749 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 FAHD2BQ6P2I3 314 aaPredicted RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 OR4K15Q8NH41 348 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 INTS12Q96CB8 462 aaKnown RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 FAHD2AQ96GK7 314 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 LIN37Q96GY3 246 aaPredicted RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 ULBP2Q9BZM5 246 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 COL27A1Q8IZC6 1860 aaPredicted RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 C9orf170A2RU37 121 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 SMAD9O15198 467 aaKnown RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 DHRS3O75911 302 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 IGHEP01854 428 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 NAT1P18440 290 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 KISS1Q15726 138 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 ALKAL2Q6UX46 152 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 C1orf210Q8IVY1 113 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 PNLDC1Q8NA58 520 aaKnown RBP13.64□□□□□ -0.23
BRF1-212ENST00000547562 OR56B1Q8NGI3 324 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 SCARB1Q8WTV0 552 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 MITD1Q8WV92 249 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 V9GYS6 101 aa13.64□□□□□ -0.23
BRF1-212ENST00000547562 OR5H14A6NHG9 310 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 B4E171 279 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 HLA-GP17693 338 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 AGTR1P30556 359 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 CALCRP30988 508 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 THBS4P35443 961 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 TSPAN7P41732 249 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 ZNF84P51523 738 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 B3GALT5-AS1P59052 145 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 IL13RA1P78552 427 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 GK2Q14410 553 aaPredicted RBP13.63□□□□□ -0.23
BRF1-212ENST00000547562 DMRTC1Q5HYR2 192 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 CRIP3Q6Q6R5 217 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 PPP1R32Q7Z5V6 425 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 ZNF546Q86UE3 836 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 C20orf196Q8IYI0 205 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 URM1Q9BTM9 101 aaKnown RBP13.63□□□□□ -0.23
BRF1-212ENST00000547562 RDH8Q9NYR8 311 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 A0A0G2JMM0 328 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 A0A1W2PPB8 328 aa13.63□□□□□ -0.23
BRF1-212ENST00000547562 A0A1W2PRS3 328 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms