RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PIGMQ9H3S5 423 aa12.36□□□□□ -0.43
CYB561A3-216ENST00000540755 TBCCD1Q9NVR7 557 aa12.36□□□□□ -0.43
CYB561A3-216ENST00000540755 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
CYB561A3-216ENST00000540755 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
CYB561A3-216ENST00000540755 RTTNQ86VV8 2226 aa12.36□□□□□ -0.43
CYB561A3-216ENST00000540755 DIDO1Q9BTC0 2240 aaKnown RBP12.36□□□□□ -0.43
CYB561A3-216ENST00000540755 DHRS7CA6NNS2 312 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 MSTNO14793 375 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 XRCC2O43543 280 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 SERPINA5P05154 406 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 SLC2A2P11168 524 aaPredicted RBP12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 ZNF20P17024 532 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 APLNRP35414 380 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 DEFA1P59665 94 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 DEFA3P59666 94 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 PMPCAQ10713 525 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 GFOD2Q3B7J2 385 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 XKRXQ6PP77 449 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 PGAP1Q75T13 922 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 NKAIN3Q8N8D7 197 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 OR5D14Q8NGL3 314 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 REEP6Q96HR9 211 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 COX4I2Q96KJ9 171 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 CREBBPQ92793 2442 aa12.35□□□□□ -0.43
CYB561A3-216ENST00000540755 C5orf49A4QMS7 147 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 HPGDSO60760 199 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 CLDN1O95832 211 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 ZNF14P17017 642 aaPredicted RBP12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 THBS4P35443 961 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 GNALP38405 381 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 TSC22D1Q15714 1073 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 GLYATL3Q5SZD4 288 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 HES5Q5TA89 166 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 GLT8D1Q68CQ7 371 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 ZNF474Q6S9Z5 364 aaPredicted RBP12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 BHLHA15Q7RTS1 189 aaPredicted RBP12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 WDR31Q8NA23 367 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 OR1M1Q8NGA1 313 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 OR51A2Q8NGJ7 313 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 TRMT10AQ8TBZ6 339 aaKnown RBP12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 AKAP1Q92667 903 aaKnown RBP eCLIP12.34□□□□□ -0.431e-6■■■■□ 24.1
CYB561A3-216ENST00000540755 SPSB4Q96A44 273 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 ZNF629Q9UEG4 869 aaPredicted RBP12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 SPATA2Q9UM82 520 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 CALCBP10092 127 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 CBR1P16152 277 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 RAB3AP20336 220 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 BDKRB2P30411 391 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 SCAND1P57086 179 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 RIN1Q13671 783 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 TMEM211Q6ICI0 200 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 LRRC28Q86X40 367 aaPredicted RBP12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 DNAAF1Q8NEP3 725 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 SLC30A7Q8NEW0 376 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 SETD6Q8TBK2 473 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 ITFG2Q969R8 447 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 FOXRED1Q96CU9 486 aaPredicted RBP12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 DIRAS2Q96HU8 199 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 VKORC1Q9BQB6 163 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 TMEM138Q9NPI0 162 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 Q9UFV3 132 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 STEAP1Q9UHE8 339 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 AMDHD2Q9Y303 409 aa12.34□□□□□ -0.43
CYB561A3-216ENST00000540755 CACNA1DQ01668 2161 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 hCG_38984A0A1B0GV85 526 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 FABP12A6NFH5 140 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 A8MXE2 369 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 J3QW42 95 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 SLC17A2O00624 439 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 SULT1B1O43704 296 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 ALX3O95076 343 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 PAHP00439 452 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 IGKV3-15P01624 115 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 ERCC1P07992 297 aaPredicted RBP12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 SNRPBP14678 240 aaKnown RBP12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 PSMB1P20618 241 aaKnown RBP12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 CCNOP22674 350 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 RANBP1P43487 201 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 CASP6P55212 293 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 TBC1D28Q2M2D7 210 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 C1QTNF12Q5T7M4 302 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 FAM166AQ6J272 317 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 DCDC5Q6ZRR9 648 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 UTS2BQ765I0 119 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 MRGPRGQ86SM5 289 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 LYPD6Q86Y78 171 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 SEMA6DQ8NFY4 1073 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 OR2AE1Q8NHA4 323 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 ZNF671Q8TAW3 534 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 MS4A3Q96HJ5 214 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 DMRTA2Q96SC8 542 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 CHST5Q9GZS9 411 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 LIN7BQ9HAP6 207 aa12.33□□□□□ -0.44
CYB561A3-216ENST00000540755 MOV10Q9HCE1 1003 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms