RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	SYT4	Q9H2B2	425 aa		4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	RAB18	Q9NP72	206 aa		4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	PNRC2	Q9NPJ4	139 aa	Known RBP	4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	ZNF391	Q9UJN7	358 aa		4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	POLR1D	Q9Y2S0	133 aa		4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	SF3B6	Q9Y3B4	125 aa	Known RBP	4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	MED31	Q9Y3C7	131 aa		4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	GMEB1	Q9Y692	573 aa		4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	TNC	P24821	2201 aa		4.18	□□□□□ -1.74
CHD4-205	ENST00000536301	KIAA2026	Q5HYC2	2103 aa		4.18	□□□□□ -1.74
CHD4-205	ENST00000536301		A0A1W2PQ09	198 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	MEX3A	A1L020	520 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301		A6NIZ1	184 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301		J3KTA2	159 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301		M0R1W7	72 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	CDC42EP2	O14613	210 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	NDUFB3	O43676	98 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SNN	O75324	88 aa	Predicted RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	KHDRBS3	O75525	346 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	OR5F1	O95221	314 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	DUS4L	O95620	317 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	IGF2	P01344	180 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SNRNP70	P08621	437 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SLC2A1	P11166	492 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	LYL1	P12980	280 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	NR2C1	P13056	603 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	CCL3L1	P16619	93 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	FAH	P16930	419 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	NDUFB7	P17568	137 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SDHA	P31040	664 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	RPS27	P42677	84 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	RBM34	P42696	430 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	CDKN2A	P42771	156 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	GPR4	P46093	362 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	YAP1	P46937	504 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	GZMM	P51124	257 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	LUM	P51884	338 aa	Predicted RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SLC18A1	P54219	525 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	WDR4	P57081	412 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	RAP1B	P61224	184 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	LSM6	P62312	80 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	RAP1A	P62834	184 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	MXRA7	P84157	204 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	TRAP1	Q12931	704 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	ECH1	Q13011	328 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	KRR1	Q13601	381 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	KCNMB1	Q16558	191 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	AANAT	Q16613	207 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	MICB	Q29980	383 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	C11orf91	Q3C1V1	193 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	KLHL22	Q53GT1	634 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	GLYATL3	Q5SZD4	288 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SLC18B1	Q6NT16	456 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	BLOC1S3	Q6QNY0	202 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	TBPL2	Q6SJ96	375 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	ZNF788	Q6ZQV5	615 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SLC36A1	Q7Z2H8	476 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	MRPL21	Q7Z2W9	205 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SBSPON	Q8IVN8	264 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	GLB1L2	Q8IW92	636 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	NRM	Q8IXM6	262 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	FAM185A	Q8N0U4	392 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	LINC00471	Q8N535	108 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	ANKRD42	Q8N9B4	389 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	C11orf65	Q8NCR3	313 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	OR9Q1	Q8NGQ5	310 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	FNDC8	Q8TC99	324 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	BPIFA2	Q96DR5	249 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	DMRTB1	Q96MA1	342 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	ZNF570	Q96NI8	536 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	PAIP2	Q9BPZ3	127 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	ZNF649	Q9BS31	505 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	WAC	Q9BTA9	647 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	PRSS22	Q9GZN4	317 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	NUAK2	Q9H093	628 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	HDHD2	Q9H0R4	259 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	METTL8	Q9H825	291 aa	Known RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	C19orf12	Q9NSK7	152 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	CCDC167	Q9P0B6	97 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	RHCG	Q9UBD6	479 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	ATPIF1	Q9UII2	106 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	A4GNT	Q9UNA3	340 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	SH3GLB1	Q9Y371	365 aa		4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.17	□□□□□ -1.74
CHD4-205	ENST00000536301	DNAH11	Q96DT5	4516 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	IGLV1-36	A0A0B4J1U3	117 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	GGT3P	A6NGU5	568 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	FAM90A8P	A6NJQ4	464 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	TRPC5OS	A6NMA1	111 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	EVPLL	A8MZ36	301 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301		H0YAE9	185 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	SOCS2	O14508	198 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	CDIPT	O14735	213 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	SIGLEC5	O15389	551 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	GMDS	O60547	372 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	PEX14	O75381	377 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	CD14	P08571	375 aa		4.16	□□□□□ -1.74
CHD4-205	ENST00000536301	MUC1	P15941	1255 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms