RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PRKCDQ05655 676 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 KRR1Q13601 381 aaKnown RBP9.89□□□□□ -0.83
SVIP-205ENST00000533774 DGUOKQ16854 277 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 AGKQ53H12 422 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 PLA1AQ53H76 456 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 ARSJQ5FYB0 599 aaPredicted RBP9.89□□□□□ -0.83
SVIP-205ENST00000533774 DMRTC1Q5HYR2 192 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 ATPAF1Q5TC12 328 aaPredicted RBP9.89□□□□□ -0.83
SVIP-205ENST00000533774 STUMQ69YW2 141 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 WDR82Q6UXN9 313 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 CCDC121Q6ZUS5 278 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 SLC36A1Q7Z2H8 476 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 MRPL21Q7Z2W9 205 aaKnown RBP9.89□□□□□ -0.83
SVIP-205ENST00000533774 OR5AU1Q8NGC0 362 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 OR10A6Q8NH74 314 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 MUC7Q8TAX7 377 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.89□□□□□ -0.83
SVIP-205ENST00000533774 DUS3LQ96G46 650 aaKnown RBP9.89□□□□□ -0.83
SVIP-205ENST00000533774 GAFA1Q96PS6 74 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 CGREF1Q99674 301 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 EBF4Q9BQW3 602 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 POLR2J2Q9GZM3 115 aaKnown RBP9.89□□□□□ -0.83
SVIP-205ENST00000533774 POLR2J3Q9H1A7 115 aaKnown RBP9.89□□□□□ -0.83
SVIP-205ENST00000533774 SNTG1Q9NSN8 517 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 AURKCQ9UQB9 309 aa9.89□□□□□ -0.83
SVIP-205ENST00000533774 A6NDX4 124 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 NKX6-3A6NJ46 265 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 EFCAB9A8MZ26 197 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 XKRYO14609 159 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 SYNGR1O43759 233 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 CHRM2P08172 466 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 CDKN2AP42771 156 aaKnown RBP9.88□□□□□ -0.83
SVIP-205ENST00000533774 GPR4P46093 362 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 SLC18A1P54219 525 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 ERVFRD-1P60508 538 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 STX1BP61266 288 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 VSNL1P62760 191 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 TRAP1Q12931 704 aaKnown RBP9.88□□□□□ -0.83
SVIP-205ENST00000533774 MALLQ13021 153 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 CNN3Q15417 329 aaKnown RBP9.88□□□□□ -0.83
SVIP-205ENST00000533774 VMACQ2NL98 169 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 LRRC10Q5BKY1 277 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 SLC18B1Q6NT16 456 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 TBPL2Q6SJ96 375 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 C10orf99Q6UWK7 81 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 LHFPL4Q7Z7J7 247 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 DHDDSQ86SQ9 333 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 MKXQ8IYA7 352 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 LINC00482Q8N8I6 264 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 FAM156AQ8NDB6 213 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 ASCL2Q99929 193 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 WDR13Q9H1Z4 485 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 NMNAT1Q9HAN9 279 aaPredicted RBP9.88□□□□□ -0.83
SVIP-205ENST00000533774 RNPEPL1Q9HAU8 725 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 MRPL15Q9P015 296 aaKnown RBP9.88□□□□□ -0.83
SVIP-205ENST00000533774 RHCGQ9UBD6 479 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 TCF19Q9Y242 345 aa9.88□□□□□ -0.83
SVIP-205ENST00000533774 TRBV23-1A0A0A0MS06 115 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 IGLV1-36A0A0B4J1U3 117 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 GGT3PA6NGU5 568 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 DUS4LO95620 317 aaKnown RBP9.87□□□□□ -0.83
SVIP-205ENST00000533774 SDHAP31040 664 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 MDH1P40925 334 aaKnown RBP9.87□□□□□ -0.83
SVIP-205ENST00000533774 YAP1P46937 504 aaKnown RBP9.87□□□□□ -0.83
SVIP-205ENST00000533774 GMFBP60983 142 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 ECH1Q13011 328 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 GLYATL3Q5SZD4 288 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 LDLRAD2Q5SZI1 272 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 ETV3LQ6ZN32 361 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 ZNF788Q6ZQV5 615 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 TSEN54Q7Z6J9 526 aaKnown RBP9.87□□□□□ -0.83
SVIP-205ENST00000533774 LNX2Q8N448 690 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 C11orf42Q8N5U0 333 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 OR1M1Q8NGA1 313 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 OR56B2PQ8NGI1 322 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 OR9Q1Q8NGQ5 310 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 ANP32BQ92688 251 aaKnown RBP9.87□□□□□ -0.83
SVIP-205ENST00000533774 PITX2Q99697 317 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 ATF6BQ99941 703 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 PRSS22Q9GZN4 317 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 SLC25A10Q9UBX3 287 aaPredicted RBP9.87□□□□□ -0.83
SVIP-205ENST00000533774 ZNF391Q9UJN7 358 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 NOP16Q9Y3C1 178 aaKnown RBP9.87□□□□□ -0.83
SVIP-205ENST00000533774 LSM4Q9Y4Z0 139 aaKnown RBP9.87□□□□□ -0.83
SVIP-205ENST00000533774 SNX13Q9Y5W8 968 aa9.87□□□□□ -0.83
SVIP-205ENST00000533774 A0A1W2PQ09 198 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 TCRBV4S1A1TA0A5B7 111 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 VGLL3A8MV65 326 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 J3KTA2 159 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 BHLHE40O14503 412 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 SOCS2O14508 198 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 FFAR1O14842 300 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
SVIP-205ENST00000533774 JUNBP17275 347 aaPredicted RBP9.86□□□□□ -0.83
SVIP-205ENST00000533774 GGT2P36268 569 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 VDAC2P45880 294 aaPredicted RBP9.86□□□□□ -0.83
SVIP-205ENST00000533774 CENPAP49450 140 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 FXYD6P3P58550 94 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 ST3GAL3Q11203 375 aa9.86□□□□□ -0.83
SVIP-205ENST00000533774 ANKDD1AQ495B1 522 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms