RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 PRKNO60260 465 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-224ENST00000533129 IGHV2-70P01814 119 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 IGHV2-5P01817 119 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 ST6GAL1P15907 406 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 PPP1CAP62136 330 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 SUPT4H1P63272 117 aaKnown RBP13.13□□□□□ -0.31
CAPN1-224ENST00000533129 IL15RAQ13261 267 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 ERV3-1Q14264 604 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 TMEM268Q5VZI3 342 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 DEGS2Q6QHC5 323 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
CAPN1-224ENST00000533129 ZNF761Q86XN6 746 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-224ENST00000533129 SFTPA2Q8IWL1 248 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 FGGYQ96C11 551 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 OR10C1Q96KK4 312 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 SLC5A6Q9Y289 635 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 TMEM14DPA8MWL7 114 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 CST4P01036 141 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 CHRM2P08172 466 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 GSTP1P09211 210 aaKnown RBP13.13□□□□□ -0.31
CAPN1-224ENST00000533129 ZNF14P17017 642 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-224ENST00000533129 GALNSP34059 522 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 ZNF117Q03924 483 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 PRTGQ2VWP7 1150 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 ANKRD55Q3KP44 614 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 ST7LQ8TDW4 575 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 GHRLQ9UBU3 117 aa13.13□□□□□ -0.31
CAPN1-224ENST00000533129 COA3Q9Y2R0 106 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-224ENST00000533129 A0A1W2PPE3 182 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 K7ESF4 209 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 AGPAT2O15120 278 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
CAPN1-224ENST00000533129 GLP1RP43220 463 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 NPY4RP50391 375 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 EBPQ15125 230 aaKnown RBP13.12□□□□□ -0.31
CAPN1-224ENST00000533129 ZNF600Q6ZNG1 722 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 METTL8Q9H825 291 aaKnown RBP13.12□□□□□ -0.31
CAPN1-224ENST00000533129 MPZL1O95297 269 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 GAPDHP04406 335 aaKnown RBP13.12□□□□□ -0.31
CAPN1-224ENST00000533129 ZNF823P16415 610 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 CD1CP29017 333 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 NXPH1P58417 271 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 PCK2Q16822 640 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 AKIRIN2Q53H80 203 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 ARMC6Q6NXE6 501 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 POMZP3Q6PJE2 187 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 Q6ZRG5 221 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 DCXRQ7Z4W1 244 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 LMX1AQ8TE12 382 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 OCSTAMPQ9BR26 566 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 MEMO1Q9Y316 297 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 ALPK2Q86TB3 2170 aa13.12□□□□□ -0.31
CAPN1-224ENST00000533129 TO15178 435 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 HKR1P10072 659 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 GNALP38405 381 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 FASLGP48023 281 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 MMP16P51512 607 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 EMP2P54851 167 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 HSD17B7P56937 341 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 TOMM34Q15785 309 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-224ENST00000533129 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-224ENST00000533129 SLC26A10Q8NG04 563 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 OR2I1PQ8NGU4 316 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 SECTM1Q8WVN6 248 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 TCTEX1D2Q8WW35 142 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 UCK1Q9HA47 277 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 FREM3P0C091 2139 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 LOC101059948A0A1B0GTJ6 334 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 HCRTR2O43614 444 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 OR8U9P0C7N5 309 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 AKR1C3P42330 323 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 AWAT1Q58HT5 328 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 ANGPTL5Q86XS5 388 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 COMMD1Q8N668 190 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 OR8U1Q8NH10 309 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 MALSU1Q96EH3 234 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 RTBDNQ9BSG5 229 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-224ENST00000533129 NXF5Q9H1B4 397 aaKnown RBP13.11□□□□□ -0.31
CAPN1-224ENST00000533129 STARD10Q9Y365 291 aa13.11□□□□□ -0.31
CAPN1-224ENST00000533129 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 OR8U8P0C7N1 319 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 RAB5AP20339 215 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 BCKDHBP21953 392 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 ACKR3P25106 362 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 EIF2S3P41091 472 aaKnown RBP13.1□□□□□ -0.31
CAPN1-224ENST00000533129 HNRNPKP61978 463 aaKnown RBP eCLIP13.1□□□□□ -0.318e-6■■■■□ 20.7
CAPN1-224ENST00000533129 ZNF529Q6P280 563 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 LHFPL1Q86WI0 220 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 EDARADDQ8WWZ3 215 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 DNASE2BQ8WZ79 361 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 TMEM41AQ96HV5 264 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 MAP3K3Q99759 626 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 NICN1Q9BSH3 213 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 LPAR5Q9H1C0 372 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 PTGES2Q9H7Z7 377 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 PRR13Q9NZ81 148 aa13.1□□□□□ -0.31
CAPN1-224ENST00000533129 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms