RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 OR11G2Q8NGC1 345 aa11.03□□□□□ -0.64
SCN3B-206ENST00000530277 OR51H1Q8NH63 302 aa11.03□□□□□ -0.64
SCN3B-206ENST00000530277 LRRC46Q96FV0 321 aa11.03□□□□□ -0.64
SCN3B-206ENST00000530277 SMIM10Q96HG1 83 aa11.03□□□□□ -0.64
SCN3B-206ENST00000530277 MAGT1Q9H0U3 335 aa11.03□□□□□ -0.64
SCN3B-206ENST00000530277 DUSP15Q9H1R2 295 aaPredicted RBP11.03□□□□□ -0.64
SCN3B-206ENST00000530277 HAO2Q9NYQ3 351 aa11.03□□□□□ -0.64
SCN3B-206ENST00000530277 GLRA1P23415 457 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 SLC25A1P53007 311 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 KLF9Q13886 244 aaPredicted RBP11.02□□□□□ -0.64
SCN3B-206ENST00000530277 ASB5Q8WWX0 329 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 SPACA9Q96E40 222 aaPredicted RBP11.02□□□□□ -0.64
SCN3B-206ENST00000530277 MVB12AQ96EY5 273 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 CNTNAP3BQ96NU0 1288 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 ZNF416Q9BWM5 594 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 MFRPQ9BY79 579 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 CRLF2Q9HC73 371 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 B4GALT7Q9UBV7 327 aa11.02□□□□□ -0.64
SCN3B-206ENST00000530277 NOSIPQ9Y314 301 aaKnown RBP11.02□□□□□ -0.64
SCN3B-206ENST00000530277 PCDHGA9Q9Y5G4 932 aaKnown RBP11.02□□□□□ -0.64
SCN3B-206ENST00000530277 PRR32B1ATL7 298 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 TO15178 435 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 RRADP55042 308 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 ACSM1Q08AH1 577 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 HLXQ14774 488 aaPredicted RBP11.02□□□□□ -0.65
SCN3B-206ENST00000530277 TSPO2Q5TGU0 170 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 VHLLQ6RSH7 139 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 SCARB1Q8WTV0 552 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 GLYATL2Q8WU03 294 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 TCEAL3Q969E4 200 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 SCMH1Q96GD3 660 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 THOC3Q96J01 351 aaKnown RBP11.02□□□□□ -0.65
SCN3B-206ENST00000530277 SLX1AQ9BQ83 275 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 GHITMQ9H3K2 345 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 ICAM5Q9UMF0 924 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 MRPS18BQ9Y676 258 aaKnown RBP11.02□□□□□ -0.65
SCN3B-206ENST00000530277 RAB19A4D1S5 217 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 WNT11O96014 354 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 MSR1P21757 451 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 ARG2P78540 354 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 CYCSP99999 105 aaKnown RBP11.02□□□□□ -0.65
SCN3B-206ENST00000530277 EGR4Q05215 589 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 PLEKHN1Q494U1 663 aaPredicted RBP11.02□□□□□ -0.65
SCN3B-206ENST00000530277 RNLSQ5VYX0 342 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 MISPQ8IVT2 679 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 MAML2Q8IZL2 1156 aaPredicted RBP11.02□□□□□ -0.65
SCN3B-206ENST00000530277 PRSS35Q8N3Z0 413 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 NKAIN3Q8N8D7 197 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 METTL9Q9H1A3 318 aa11.02□□□□□ -0.65
SCN3B-206ENST00000530277 ANKRD20A5PA0PJZ0 165 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 H3BP45 60 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 CPT2P23786 658 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 NAA40Q86UY6 237 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 CDC20BQ86Y33 519 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 SPEM1Q8N4L4 309 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 CTHRC1Q96CG8 243 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 ADAT3Q96EY9 351 aaPredicted RBP11.01□□□□□ -0.65
SCN3B-206ENST00000530277 PTTG3PQ9NZH4 202 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 WIF1Q9Y5W5 379 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 PUS1Q9Y606 427 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCN3B-206ENST00000530277 CDH23Q9H251 3354 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 LOC101059948A0A1B0GTJ6 334 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 SMCO3A2RU48 225 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 TXNL1O43396 289 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 TIAF1O95411 115 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 APOC1P02654 83 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 CD80P33681 288 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 THBS2P35442 1172 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 OR2B11Q5JQS5 317 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 C19orf48Q6RUI8 117 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 ANKRD37Q7Z713 158 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 FAM213BQ8TBF2 198 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 ST8SIA1Q92185 356 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 NPAS1Q99742 590 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 TRAF4Q9BUZ4 470 aaPredicted RBP11.01□□□□□ -0.65
SCN3B-206ENST00000530277 FAM234AQ9H0X4 552 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 DEFB127Q9H1M4 99 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 ANAPC1Q9H1A4 1944 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 A6NCN8 305 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 LEUTXA8MZ59 168 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 NME2P1O60361 137 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 SERPINE2P07093 398 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 VSIG10L2P0DP72 767 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 SLC25A26Q70HW3 274 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 SLC25A45Q8N413 288 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 CCDC54Q8NEL0 328 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 ZNF721Q8TF20 911 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 DYRK2Q92630 601 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 WNT2BQ93097 391 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 MCHR2Q969V1 340 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 EVA1AQ9H8M9 152 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 MTCH2Q9Y6C9 303 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 DOCK10Q96BY6 2186 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 CACNA1BQ00975 2339 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 MCRIP1C9JLW8 97 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 RAB27BO00194 218 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 RGS13O14921 159 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 KLF4O43474 513 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 GLAP06280 429 aa11.01□□□□□ -0.65
SCN3B-206ENST00000530277 SNTB1Q13884 538 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms