RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 LOC100509620A0A075B734 347 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 MEGF11A6BM72 1044 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 UPK1BO75841 260 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 DHRS3O75911 302 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 EIF4EP06730 217 aaKnown RBP12.48□□□□□ -0.41
TTC39A-216ENST00000530004 RNF224P0DH78 156 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 CCNOP22674 350 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 STOMP27105 288 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 DDOSTP39656 456 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 IFITM3Q01628 133 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 PLP2Q04941 152 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 TFF3Q07654 80 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 GABRA6Q16445 453 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 GSG1Q2KHT4 349 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 GLT8D1Q68CQ7 371 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 MDP1Q86V88 176 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 C1orf162Q8NEQ5 155 aaPredicted RBP12.48□□□□□ -0.41
TTC39A-216ENST00000530004 OR2AE1Q8NHA4 323 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 RNASE6Q93091 150 aaKnown RBP12.48□□□□□ -0.41
TTC39A-216ENST00000530004 REEP6Q96HR9 211 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 BOD1Q96IK1 185 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 B3GNT2Q9NY97 397 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 EXTL2Q9UBQ6 330 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 V9GYS6 101 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 C5orf49A4QMS7 147 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 CLEC18AA5D8T8 446 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 CALCBP10092 127 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 CCL2P13500 99 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 RAB3AP20336 220 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 AZGP1P25311 298 aaKnown RBP12.47□□□□□ -0.41
TTC39A-216ENST00000530004 CCKARP32238 428 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 UBE2NP61088 152 aaKnown RBP12.47□□□□□ -0.41
TTC39A-216ENST00000530004 GLYATL3Q5SZD4 288 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 CLEC18BQ6UXF7 455 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 Q6ZSR3 168 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 BHLHA15Q7RTS1 189 aaPredicted RBP12.47□□□□□ -0.41
TTC39A-216ENST00000530004 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 NKAIN3Q8N8D7 197 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 CLEC18CQ8NCF0 446 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 OR1M1Q8NGA1 313 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 OR13C9Q8NGT0 318 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 LRRC46Q96FV0 321 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 SDHCQ99643 169 aaPredicted RBP12.47□□□□□ -0.41
TTC39A-216ENST00000530004 NKX3-1Q99801 234 aaPredicted RBP12.47□□□□□ -0.41
TTC39A-216ENST00000530004 MRI1Q9BV20 369 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 SRRQ9GZT4 340 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 ABCB10Q9NRK6 738 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 CYSLTR2Q9NS75 346 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 CGGBP1Q9UFW8 167 aaPredicted RBP12.47□□□□□ -0.41
TTC39A-216ENST00000530004 STEAP1Q9UHE8 339 aa12.47□□□□□ -0.41
TTC39A-216ENST00000530004 C16orf97H3BN30 126 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 SLC17A2O00624 439 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 MTRF1O75570 445 aaKnown RBP12.46□□□□□ -0.41
TTC39A-216ENST00000530004 APOA1P02647 267 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 IL32P24001 234 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 CFPP27918 469 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 BDKRB2P30411 391 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 TALDO1P37837 337 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 IL18Q14116 193 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 RAB11BQ15907 218 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 ZNF529Q6P280 563 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 METAP1DQ6UB28 335 aaPredicted RBP12.46□□□□□ -0.41
TTC39A-216ENST00000530004 PGAP1Q75T13 922 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 CCDC36Q8IYA8 594 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 C17orf78Q8N4C9 275 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 CCDC54Q8NEL0 328 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 OR4M1Q8NGD0 313 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 SSC4DQ8WTU2 575 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 SOSTQ9BQB4 213 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 CCDC32Q9BV29 185 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 C1QTNF5Q9BXJ0 243 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 OR5V1Q9UGF6 321 aa12.46□□□□□ -0.41
TTC39A-216ENST00000530004 A0A1W2PR80 420 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 GRNP28799 593 aaKnown RBP12.46□□□□□ -0.42
TTC39A-216ENST00000530004 APLNRP35414 380 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 P2RY14Q15391 338 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 ZNF181Q2M3W8 571 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 UBE2NLQ5JXB2 153 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 JAGN1Q8N5M9 183 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 STEAP2Q8NFT2 490 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 POM121L2Q96KW2 1035 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 ACTR6Q9GZN1 396 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 RGCCQ9H4X1 137 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 TMEM138Q9NPI0 162 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 ZNF391Q9UJN7 358 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 PIGLQ9Y2B2 252 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 ETV7Q9Y603 341 aa12.46□□□□□ -0.42
TTC39A-216ENST00000530004 LOC390937A0A1W2PQ73 354 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 OR5H1A6NKK0 313 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 SULT1B1O43704 296 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 CD37P11049 281 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 FAHP16930 419 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 HOXC12P31275 282 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 THBS4P35443 961 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 PYDC2Q56P42 97 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 FAM166AQ6J272 317 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 COLCA1Q6ZS62 124 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 OR8H2Q8N162 312 aa12.45□□□□□ -0.42
TTC39A-216ENST00000530004 DTX3Q8N9I9 347 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms