RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SPOCK1Q08629 439 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 TNK1Q13470 666 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 FCN2Q15485 313 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 ABHD17BQ5VST6 288 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 ZNF782Q6ZMW2 699 aaPredicted RBP10.35□□□□□ -0.75
USF1-208ENST00000528768 ZNF627Q7L945 461 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 SPTSSAQ969W0 71 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 PPP1R14AQ96A00 147 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 SLC25A28Q96A46 364 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 PGAM5Q96HS1 289 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 RNF170Q96K19 258 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 SFXN2Q96NB2 322 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 TMEM246Q9BRR3 403 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 BEX2Q9BXY8 128 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 ULBP2Q9BZM5 246 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 METTL17Q9H7H0 456 aaPredicted RBP10.35□□□□□ -0.75
USF1-208ENST00000528768 NOX3Q9HBY0 568 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 PROK2Q9HC23 129 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 NKIRAS2Q9NYR9 191 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 MRPL15Q9P015 296 aaKnown RBP10.35□□□□□ -0.75
USF1-208ENST00000528768 ASH2LQ9UBL3 628 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 LHFPL6Q9Y693 200 aa10.35□□□□□ -0.75
USF1-208ENST00000528768 H0YC42 278 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 WDPCPO95876 746 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 WNT11O96014 354 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 GTF2F2P13984 249 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 CX3CR1P49238 355 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 PRKXP51817 358 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 SOX8P57073 446 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 ECH1Q13011 328 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 RBMS2Q15434 407 aaKnown RBP10.34□□□□□ -0.75
USF1-208ENST00000528768 B3GNTL1Q67FW5 361 aaPredicted RBP10.34□□□□□ -0.75
USF1-208ENST00000528768 CFAP77Q6ZQR2 320 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 FOXL2NBQ6ZUU3 175 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 BEST3Q8N1M1 668 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 GALNT16Q8N428 558 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 MEIOBQ8N635 442 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 TMEM229BQ8NBD8 167 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 CCDC107Q8WV48 283 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 NUDT16L1Q9BRJ7 211 aaKnown RBP10.34□□□□□ -0.75
USF1-208ENST00000528768 UTP23Q9BRU9 249 aaKnown RBP10.34□□□□□ -0.75
USF1-208ENST00000528768 OR10A4Q9H209 315 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 FBLN5Q9UBX5 448 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 KLK11Q9UBX7 282 aa10.34□□□□□ -0.75
USF1-208ENST00000528768 PKDREJQ9NTG1 2253 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 PCNX3Q9H6A9 2034 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 MEIKINA0A087WXM9 373 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 CIB4A0PJX0 185 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 ZNF814B7Z6K7 855 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 G3V3Y1 287 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 TNFSF11O14788 317 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 ARPC1BO15143 372 aaKnown RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 CREBL2O60519 120 aaPredicted RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 MTRF1O75570 445 aaKnown RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 TRAPPC6AO75865 159 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 ALDOBP05062 364 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 CHRM2P08172 466 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 SULT1A3P0DMM9 295 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 SULT1A4P0DMN0 295 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 ZNF24P17028 368 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 CCL1P22362 96 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 CDAP32320 146 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 ZNF121P58317 390 aaPredicted RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 GALK2Q01415 458 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 MEF2DQ14814 521 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 CCDC92Q53HC0 331 aaPredicted RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 ZNF813Q6ZN06 617 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 OR2W3Q7Z3T1 314 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 ABHD12BQ7Z5M8 362 aaPredicted RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 FJX1Q86VR8 437 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 C20orf196Q8IYI0 205 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 ZNF808Q8N4W9 903 aaPredicted RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 PNLDC1Q8NA58 520 aaKnown RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 OR10S1Q8NGN2 331 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 OR1J2Q8NGS2 313 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 OR2V1Q8NHB1 315 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 OR51E1Q8TCB6 317 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 GPX8Q8TED1 209 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 C10orf35Q96D05 121 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 CPNE2Q96FN4 548 aaPredicted RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 THOC3Q96J01 351 aaKnown RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 FAM173AQ9BQD7 235 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 RBM24Q9BX46 236 aaKnown RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 ZFP64Q9NPA5 681 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 CGGBP1Q9UFW8 167 aaPredicted RBP10.33□□□□□ -0.76
USF1-208ENST00000528768 SCP2D1Q9UJQ7 156 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 PCSK5Q92824 1860 aa10.33□□□□□ -0.76
USF1-208ENST00000528768 A0A0J9YW62 118 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 DISC1C4P0D8 188 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 LDLRAD4O15165 306 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 GMDSO60547 372 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 ICMTO60725 284 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 CYB5AP00167 134 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 TMIGD3P0DMS9 266 aaPredicted RBP10.32□□□□□ -0.76
USF1-208ENST00000528768 CPN1P15169 458 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 GDF1P27539 372 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 THBS4P35443 961 aa10.32□□□□□ -0.76
USF1-208ENST00000528768 ZNF93P35789 620 aaPredicted RBP10.32□□□□□ -0.76
USF1-208ENST00000528768 MECP2P51608 486 aaKnown RBP10.32□□□□□ -0.76
USF1-208ENST00000528768 EFNB2P52799 333 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms