RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 PLPP7Q8NBV4 271 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 ZNF555Q8NEP9 628 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 OR10H4Q8NGA5 316 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 OR8S1Q8NH09 359 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 OR51F2Q8NH61 342 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 Q8TCH9 128 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 Q96MT0 163 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 SOX7Q9BT81 388 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 FN3KRPQ9HA64 309 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 C14orf119Q9NWQ9 140 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 ZNF319Q9P2F9 582 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 CDC42EP3Q9UKI2 254 aa12.15□□□□□ -0.46
NXF1-204ENST00000527064 NF1P21359 2839 aa12.15□□□□□ -0.47
NXF1-204ENST00000527064 LOC100130705A0A1B0GUX0 176 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 PRR32B1ATL7 298 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 LOC110117498-PIK3R3F6TDL0 507 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 TMEM178BH3BS89 294 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 ENTPD6O75354 484 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 CRLF1O75462 422 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 IGHV2-5P01817 119 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 HNF1AP20823 631 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 MDH2P40926 338 aaKnown RBP12.14□□□□□ -0.47
NXF1-204ENST00000527064 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
NXF1-204ENST00000527064 LMO4P61968 165 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 MAB21L1Q13394 359 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 TMEM155Q4W5P6 130 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 GLCCI1Q86VQ1 547 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 KLHL36Q8N4N3 616 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 RFLNBQ8N5W9 214 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 ZNF420Q8TAQ5 688 aaPredicted RBP12.14□□□□□ -0.47
NXF1-204ENST00000527064 SIGLEC11Q96RL6 698 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 MYCBPQ99417 103 aaPredicted RBP12.14□□□□□ -0.47
NXF1-204ENST00000527064 TBX5Q99593 518 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 APOL4Q9BPW4 351 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 PAPOLGQ9BWT3 736 aaKnown RBP12.14□□□□□ -0.47
NXF1-204ENST00000527064 PBOV1Q9GZY1 135 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 NUFIP1Q9UHK0 495 aaKnown RBP12.14□□□□□ -0.47
NXF1-204ENST00000527064 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 R4GMQ9 66 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 CSPG4Q6UVK1 2322 aa12.14□□□□□ -0.47
NXF1-204ENST00000527064 A0A1W2PQL4 384 aaPredicted RBP12.13□□□□□ -0.47
NXF1-204ENST00000527064 ANXA2P2A6NMY6 339 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 SLC16A6O15403 523 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 SULT1C4O75897 302 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 APOL3O95236 402 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 PTBP3O95758 552 aaKnown RBP12.13□□□□□ -0.47
NXF1-204ENST00000527064 MSMBP08118 114 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 ATP6V1B1P15313 513 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 IL5RAQ01344 420 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 CHRFAM7AQ494W8 412 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 BCL2L15Q5TBC7 163 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 FAM220AQ7Z4H9 259 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 ENTHD1Q8IYW4 607 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 YIPF7Q8N8F6 280 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 DVL3Q92997 716 aaPredicted RBP12.13□□□□□ -0.47
NXF1-204ENST00000527064 RNFT2Q96EX2 444 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 POM121Q96HA1 1249 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 SHARPINQ9H0F6 387 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 FAM118AQ9NWS6 357 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 DCAF16Q9NXF7 216 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 UBAP1Q9NZ09 502 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 MRM2Q9UI43 246 aaKnown RBP12.13□□□□□ -0.47
NXF1-204ENST00000527064 GTF2A1LQ9UNN4 478 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 PCDHGB1Q9Y5G3 927 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 MPC1Q9Y5U8 109 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 SNX5Q9Y5X3 404 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 ABCA1O95477 2261 aa12.13□□□□□ -0.47
NXF1-204ENST00000527064 TLN2Q9Y4G6 2542 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 YLPM1P49750 1951 aaKnown RBP12.12□□□□□ -0.47
NXF1-204ENST00000527064 IGHV3-64DA0A0J9YX35 117 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 METTL15A6NJ78 407 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 FAM157AC9JC47 383 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 ANKRD65E5RJM6 399 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 MTRF1O75570 445 aaKnown RBP12.12□□□□□ -0.47
NXF1-204ENST00000527064 FSTL3O95633 263 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 CYB5R3P00387 301 aaPredicted RBP12.12□□□□□ -0.47
NXF1-204ENST00000527064 CPT2P23786 658 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 MAP2K3P46734 347 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 MFGE8Q08431 387 aaPredicted RBP12.12□□□□□ -0.47
NXF1-204ENST00000527064 ZMYND11Q15326 602 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 PRAMEF6Q5VXH4 476 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 PLEKHG7Q6ZR37 379 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 LRRC28Q86X40 367 aaPredicted RBP12.12□□□□□ -0.47
NXF1-204ENST00000527064 GALNT4Q8N4A0 578 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 UBE2FQ969M7 185 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 MRPL48Q96GC5 212 aaKnown RBP12.12□□□□□ -0.47
NXF1-204ENST00000527064 LYZL4Q96KX0 146 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 MICU1Q9BPX6 476 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 BEX2Q9BXY8 128 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 VCXQ9H320 206 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 DYSFO75923 2080 aa12.12□□□□□ -0.47
NXF1-204ENST00000527064 C2CD3Q4AC94 2353 aa12.11□□□□□ -0.47
NXF1-204ENST00000527064 TRAV20A0A0B4J274 112 aa12.11□□□□□ -0.47
NXF1-204ENST00000527064 ZNF816-ZNF321PA0A0X1KG74 233 aa12.11□□□□□ -0.47
NXF1-204ENST00000527064 A6NLC8 198 aa12.11□□□□□ -0.47
NXF1-204ENST00000527064 FAM20BO75063 409 aa12.11□□□□□ -0.47
NXF1-204ENST00000527064 SRSF10O75494 262 aaKnown RBP12.11□□□□□ -0.47
NXF1-204ENST00000527064 CST4P01036 141 aa12.11□□□□□ -0.47
NXF1-204ENST00000527064 GABRB1P18505 474 aa12.11□□□□□ -0.47
NXF1-204ENST00000527064 ACKR3P25106 362 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms