RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 HIST1H2ABP04908 130 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 CSF1P09603 554 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 IGHV1-2P23083 117 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 CXCR1P25024 350 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 EVI2BP34910 448 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 PSMB10P40306 273 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 EVX1P49640 407 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 IDH3GP51553 393 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 P2RX1P51575 399 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 POLR2HP52434 150 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 GBX2P52951 348 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 TAS2R43P59537 309 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 PPP3R1P63098 170 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 QPRTQ15274 297 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 TRAM1Q15629 374 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 SGCBQ16585 318 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 ACSM3Q53FZ2 586 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 ALG10Q5BKT4 473 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 MZT2AQ6P582 158 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 CNIH2Q6PI25 160 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 FAM131AQ6UXB0 335 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 UNQ9370/PRO34162Q6UXP9 181 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 C8orf86Q6ZUL3 223 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 HIST3H2AQ7L7L0 130 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 NUP54Q7Z3B4 507 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 CEACAM19Q7Z692 300 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 JAZF1Q86VZ6 243 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 SYS1Q8N2H4 156 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 CELF2-AS1Q8N7Q2 184 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 POMGNT2Q8NAT1 580 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 OR4F5Q8NH21 305 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 GHSRQ92847 366 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 HIST1H2ACQ93077 130 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 PHF21AQ96BD5 680 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 MUCL1Q96DR8 90 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 TSSK2Q96PF2 358 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 NEDD4LQ96PU5 975 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 TSPAN32Q96QS1 320 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 CNN2Q99439 309 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 NPAS1Q99742 590 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 ALG12Q9BV10 488 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 PTDSS2Q9BVG9 487 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 FKRPQ9H9S5 495 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 SRA1Q9HD15 236 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 RPRD1BQ9NQG5 326 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 TAS2R5Q9NYW4 299 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 PRSS50Q9UI38 385 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 KLHDC2Q9Y2U9 406 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 SLC25A15Q9Y619 301 aa6.2□□□□□ -1.42
CTNNA1-227ENST00000521387 TRAV36DV7A0A075B6V5 113 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 LINC00854A0A1B0GVQ3 168 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 A0A1W2PQ09 198 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 A0A1W2PR80 420 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 TVP23AA6NH52 213 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 OR5H1A6NKK0 313 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 C11orf98E9PRG8 122 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 ATP6V1G2-DDX39BF2Z307 99 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 H7C1C5 153 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 DCTN6O00399 190 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 NPIPB7O75200 414 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 SERPINI2O75830 405 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 SC5DO75845 299 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 NUDT14O95848 222 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 PTTG1O95997 202 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 CD1AP06126 327 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 PSKH1P11801 424 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 IL7P13232 177 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 GRPRP30550 384 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 SDHAP31040 664 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 EIF1AXP47813 144 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 RFX2P48378 723 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 TMED10P49755 219 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 GDI2P50395 445 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 OR10A3P58181 314 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 DEFA1P59665 94 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 DEFA3P59666 94 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 RPS11P62280 158 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 SNRPD2P62316 118 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 LCN6P62502 163 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 TNP2Q05952 138 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 KRR1Q13601 381 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 CBFBQ13951 182 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 EFR3AQ14156 821 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 CDK5R1Q15078 307 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 C2orf68Q2NKX9 166 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 PYDC2Q56P42 97 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 MESTQ5EB52 335 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 ZNF684Q5T5D7 378 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 IDNKQ5T6J7 187 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 DDI2Q5TDH0 399 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 RPL22L1Q6P5R6 122 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 SLC16A9Q7RTY1 509 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 NANOGNBQ7Z5D8 188 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 PXKQ7Z7A4 578 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 TUSC5Q8IXB3 177 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 GDPD1Q8N9F7 314 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 FADS6Q8N9I5 356 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 IL17RDQ8NFM7 739 aa6.19□□□□□ -1.42
CTNNA1-227ENST00000521387 OR6K6Q8NGW6 343 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms