RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 BSNQ9UPA5 3926 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 A0A0A6YYJ9 748 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 hCG_1807616A0A1W2PRN6 198 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 FAM171A2A8MVW0 826 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 KRBOX1C9JBD0 128 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ATP6V1G2-DDX39BF2Z307 99 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ABCD4O14678 606 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SURF4O15260 269 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 HPGDSO60760 199 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 UPK3AO75631 287 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SCO1O75880 301 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 PPP1R3DO95685 299 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 THY1P04216 161 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 TP53P04637 393 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SERPINA5P05154 406 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 HEXAP06865 529 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ITGA5P08648 1049 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 FREM3P0C091 2139 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SELEP16581 610 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ATF4P18848 351 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 PTNP21246 168 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 TNFSF4P23510 183 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 CD40P25942 277 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 HSD11B1P28845 292 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 MTNR1BP49286 362 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF133P52736 654 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SLC25A1P53007 311 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 DSCR9P59020 149 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 RAB1AP62820 205 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ADAM8P78325 824 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 FABP5Q01469 135 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 BSPH1Q075Z2 132 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SRSF1Q07955 248 aaKnown RBP eCLIP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 EXOSC2Q13868 293 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 IL18Q14116 193 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF273Q14593 569 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 P2RY14Q15391 338 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SNAPC1Q16533 368 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 HIST3H3Q16695 136 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 PGGHGQ32M88 737 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 LGALSLQ3ZCW2 172 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF672Q499Z4 452 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 CLEC12AQ5QGZ9 265 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 C9orf135Q5VTT2 229 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF57Q68EA5 555 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 KCTD18Q6PI47 426 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 RHOUQ7L0Q8 258 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF611Q8N823 705 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZIC4Q8N9L1 334 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SLC30A7Q8NEW0 376 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 NUP37Q8NFH4 326 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 OR11H7Q8NGC8 314 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 OR52E2Q8NGJ4 325 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF519Q8TB69 540 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ASB17Q8WXJ9 295 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 C11orf40Q8WZ69 217 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 NSMAFQ92636 917 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 BCL2L2Q92843 193 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 RFT1Q96AA3 541 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 POM121Q96HA1 1249 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SAMD8Q96LT4 415 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF582Q96NG8 517 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 TSPAN32Q96QS1 320 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 IL4I1Q96RQ9 567 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 DIRC2Q96SL1 478 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 KLHDC3Q9BQ90 382 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 JAM3Q9BX67 310 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 MRPL13Q9BYD1 178 aaKnown RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 REG4Q9BYZ8 158 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SHARPINQ9H0F6 387 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SYT4Q9H2B2 425 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 OR51J1Q9H342 316 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 DPAGT1Q9H3H5 408 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 MS4A5Q9H3V2 200 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF442Q9H7R0 627 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 UBTD1Q9HAC8 227 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 DYNLRB1Q9NP97 96 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 CMC2Q9NRP2 79 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 PLEK2Q9NYT0 353 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF224Q9NZL3 707 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 COMMD3Q9UBI1 195 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ZNF391Q9UJN7 358 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 ING1Q9UK53 422 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 MAB21L2Q9Y586 359 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 SLC25A15Q9Y619 301 aa4.92□□□□□ -1.62
CTNNA1-220ENST00000520260 CACNA1CQ13936 2221 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 A0A096LPE4 126 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 A0A1W2PPZ6 126 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 MFSD2BA6NFX1 497 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 ANKRD61A6NGH8 418 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 B9A039 149 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 LRRN3E7EW58 273 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 CDC42EP2O14613 210 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 KLF4O43474 513 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 SGCEO43556 437 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 DOK2O60496 412 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 RAMP1O60894 148 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 TSC22D2O75157 780 aa4.91□□□□□ -1.62
CTNNA1-220ENST00000520260 PTP4A3O75365 173 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms