RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 CHRDL1Q9BU40 450 aa12.02□□□□□ -0.48
TCOF1-214ENST00000515035 SLC35B3Q9H1N7 401 aa12.02□□□□□ -0.48
TCOF1-214ENST00000515035 SIRT5Q9NXA8 310 aa12.02□□□□□ -0.48
TCOF1-214ENST00000515035 MYH14Q7Z406 1995 aaKnown RBP12.02□□□□□ -0.48
TCOF1-214ENST00000515035 XKRY2A2RUG3 117 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 OR5K3A6NET4 321 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 AP4M1O00189 453 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 ADH4P08319 380 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 DCDP81605 110 aaKnown RBP12.02□□□□□ -0.49
TCOF1-214ENST00000515035 GSG1Q2KHT4 349 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 C12orf73Q69YU5 71 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 CYHR1Q6ZMK1 362 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 TECTBQ96PL2 329 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 SLCO1C1Q9NYB5 712 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 PRSS37A4D1T9 235 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 CLEC18AA5D8T8 446 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 CRYM-AS1A6NIL9 109 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 FGF17O60258 216 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 TTRP02766 147 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 ERVFC1-1P60608 527 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 C9orf152Q5JTZ5 239 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 OTPQ5XKR4 325 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 PARM1Q6UWI2 310 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 C19orf35Q6ZS72 473 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 CDC20BQ86Y33 519 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 CISD2Q8N5K1 135 aaKnown RBP12.02□□□□□ -0.49
TCOF1-214ENST00000515035 CLEC18CQ8NCF0 446 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 WFDC5Q8TCV5 224 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 FAM210BQ96KR6 192 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 CMTM3Q96MX0 182 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 EDEM2Q9BV94 578 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 KCND3Q9UK17 655 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 RGS13O14921 159 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 HMGA1P17096 107 aaKnown RBP12.02□□□□□ -0.49
TCOF1-214ENST00000515035 RUNX2Q13950 521 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 C1QTNF12Q5T7M4 302 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 LAIR1Q6GTX8 287 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 RTL8AQ9BWD3 113 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 PBOV1Q9GZY1 135 aa12.02□□□□□ -0.49
TCOF1-214ENST00000515035 SIRT3Q9NTG7 399 aaPredicted RBP12.02□□□□□ -0.49
TCOF1-214ENST00000515035 A0A087X0M5 115 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 A0A1B0GX30 115 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 PMS2P11Q13670 270 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 TCTEX1D1Q8N7M0 179 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 NHLRC2Q8NBF2 726 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 HS3ST3A1Q9Y663 406 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 LEUTXA8MZ59 168 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 ETHE1O95571 254 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 IGHV3-9P01782 118 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 LIMS3P0CW19 117 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 LIMS4P0CW20 117 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 ZNF250P15622 560 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 CD22P20273 847 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 CD27P26842 260 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 DHRS2Q13268 280 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 ZNF77Q15935 545 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 TMEM52BQ4KMG9 183 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 ARHGEF39Q8N4T4 335 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 BCORP1Q8N888 145 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 PHYHIPLQ96FC7 376 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 NOL4LQ96MY1 436 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-214ENST00000515035 LANCL2Q9NS86 450 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 SLC17A4Q9Y2C5 497 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 POMT1Q9Y6A1 747 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 PHIPQ8WWQ0 1821 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 M0R143 59 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 TCAPO15273 167 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 CNIH1O95406 144 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 NRASP01111 189 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 TBXA2RP21731 343 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 SDHBP21912 280 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 PCBP3P57721 371 aaKnown RBP12.01□□□□□ -0.49
TCOF1-214ENST00000515035 AGERQ15109 404 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 LHFPL2Q6ZUX7 228 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 RSRP1Q9BUV0 290 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 KIR3DX1Q9H7L2 352 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 MASP2O00187 686 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 VAMP5O95183 116 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 GPR12P47775 334 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 ELAVL1Q15717 326 aaKnown RBP12.01□□□□□ -0.49
TCOF1-214ENST00000515035 SSX1Q16384 188 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 DCAF12Q5T6F0 453 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 CALHM3Q86XJ0 350 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 SCCPDHQ8NBX0 429 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 PINX1Q96BK5 328 aaKnown RBP12.01□□□□□ -0.49
TCOF1-214ENST00000515035 GOLT1BQ9Y3E0 138 aa12.01□□□□□ -0.49
TCOF1-214ENST00000515035 ELFN2Q5R3F8 820 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 THEM4Q5T1C6 240 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 OR5AS1Q8N127 324 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 ZDHHC22Q8N966 263 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 UTP23Q9BRU9 249 aaKnown RBP12□□□□□ -0.49
TCOF1-214ENST00000515035 SPAG17Q6Q759 2223 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 SMIM6P0DI80 62 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 PNLIPRP3Q17RR3 467 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 TBC1D28Q2M2D7 210 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 POLDIP2Q9Y2S7 368 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 TLCD2A6NGC4 264 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 NKX6-3A6NJ46 265 aa12□□□□□ -0.49
TCOF1-214ENST00000515035 SIRPB1O00241 398 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms