RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 SYT7O43581 403 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 IFNA21P01568 189 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 RPL12P30050 165 aaKnown RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 LTBRP36941 435 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 PPICP45877 212 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 DVL1P1P54792 670 aaPredicted RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 ACY1Q03154 408 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 ZNF74Q16587 644 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 ANGPTL5Q86XS5 388 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 SUMF2Q8NBJ7 301 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 OR9K2Q8NGE7 335 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 OTOSQ8NHW6 89 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 FAM71F1Q96KD3 344 aaPredicted RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 OR8B4Q96RC9 309 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 CCNL2Q96S94 520 aaPredicted RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 COA3Q9Y2R0 106 aaPredicted RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 SLCO1B1Q9Y6L6 691 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 MEGF11A6BM72 1044 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 NUDT19A8MXV4 375 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 EFSO43281 561 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 ZNF264O43296 627 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 H2AFB1P0C5Y9 115 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 GLRA1P23415 457 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 FASLGP48023 281 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 FHITP49789 147 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 SULT1A1P50225 295 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 NKX6-1P78426 367 aaPredicted RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 RHEBQ15382 184 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 ISXQ2M1V0 245 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 HLA-DQA1Q5Y7H0 255 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 CHRDL2Q6WN34 429 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 SMRP1Q8NCR6 262 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 ZNF248Q8NDW4 579 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 SLC30A7Q8NEW0 376 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 ASB17Q8WXJ9 295 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 THRSPQ92748 146 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 NRSN2Q9GZP1 204 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 FBXL17Q9UF56 701 aa8.6□□□□□ -1.03
VCAN-210ENST00000513960 GDF2Q9UK05 429 aaPredicted RBP8.6□□□□□ -1.03
VCAN-210ENST00000513960 TRBV5-7A0A0A0MS05 114 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 C17orf51A8MQB3 221 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 PHYHO14832 338 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 FGF16O43320 207 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 GATCO43716 136 aaKnown RBP8.59□□□□□ -1.03
VCAN-210ENST00000513960 CD1AP06126 327 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 CX3CR1P49238 355 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 GFERP55789 205 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 DRAM2Q6UX65 266 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 CLEC18BQ6UXF7 455 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 DCXRQ7Z4W1 244 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 TMEM151BQ8IW70 566 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 ASB5Q8WWX0 329 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 NICN1Q9BSH3 213 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 ABHD6Q9BV23 337 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 C1orf198Q9H425 327 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 CNTD2Q9H8S5 307 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 LRP12Q9Y561 859 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 FLVCR1Q9Y5Y0 555 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 XIRP2A4UGR9 3374 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 H0YIG0 161 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 ZNF735P0CB33 412 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 CD79AP11912 226 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 EGR3Q06889 387 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 CD226Q15762 336 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 CHRFAM7AQ494W8 412 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 SOHLH1Q5JUK2 328 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.59□□□□□ -1.03
VCAN-210ENST00000513960 EXD3Q8N9H8 876 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 OR52N4Q8NGI2 321 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 FNDC9Q8TBE3 224 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 OR10C1Q96KK4 312 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 MMP25Q9NPA2 562 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 GAR1Q9NY12 217 aaKnown RBP8.59□□□□□ -1.03
VCAN-210ENST00000513960 OR52A1Q9UKL2 312 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 RHBDD3Q9Y3P4 386 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 REV3LO60673 3130 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 IGHV5-51A0A0C4DH38 117 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 TLCD2A6NGC4 264 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 UTS2O95399 124 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 DIRAS3O95661 229 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 IGLV3-19P01714 112 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 PRF1P14222 555 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 ACKR3P25106 362 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 CD38P28907 300 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 RAP1AP62834 184 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 SSBP1Q04837 148 aaKnown RBP8.59□□□□□ -1.03
VCAN-210ENST00000513960 CHAF1BQ13112 559 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 ACKR1Q16570 336 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 C21orf62-AS1Q17RA5 79 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 COL13A1Q5TAT6 717 aaPredicted RBP8.59□□□□□ -1.03
VCAN-210ENST00000513960 CYB5R2Q6BCY4 276 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 PRSS54Q6PEW0 395 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 UBAC2Q8NBM4 344 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 ZDHHC12Q96GR4 267 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 SLC46A1Q96NT5 459 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 NXF5Q9H1B4 397 aaKnown RBP8.59□□□□□ -1.03
VCAN-210ENST00000513960 PTGES2Q9H7Z7 377 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 RAB22AQ9UL26 194 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 B3GALT1Q9Y5Z6 326 aa8.59□□□□□ -1.03
VCAN-210ENST00000513960 LILRA5A6NI73 299 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms