RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 RBBP4Q09028 425 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 GAMTQ14353 236 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 FAM174BQ3ZCQ3 159 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 GTDC1Q4AE62 458 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 NPSR1Q6W5P4 371 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 WFDC11Q8NEX6 87 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 OR7G2Q8NG99 324 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 MCUR1Q96AQ8 359 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 NODALQ96S42 347 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 FUNDC2Q9BWH2 189 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 RBM24Q9BX46 236 aaKnown RBP4.2□□□□□ -1.74
NEK1-204ENST00000509912 DIABLOQ9NR28 239 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 NUP50Q9UKX7 468 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 MCTS1Q9ULC4 181 aaKnown RBP4.2□□□□□ -1.74
NEK1-204ENST00000509912 ABCA4P78363 2273 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 ABCA2Q9BZC7 2435 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 NAV3Q8IVL0 2385 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 TRAV24A0A0B4J272 114 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 A0A0U1RQV5 110 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 CCDC160A6NGH7 325 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 UPK1AO00322 258 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 NOL3O60936 208 aaKnown RBP4.2□□□□□ -1.74
NEK1-204ENST00000509912 SCN2BO60939 215 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 OR7A10O76100 309 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 AQP8O94778 261 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 YES1P07947 543 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 GDF1P27539 372 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 IER3P46695 156 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 PLA2G16P53816 162 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 ERVK-8P63133 956 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 PLCXD2Q0VAA5 305 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 FADDQ13158 208 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 PMS2P3Q13401 168 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 SAPCD1Q5SSQ6 148 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 PYHIN1Q6K0P9 492 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 DLEU7Q6UYE1 221 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 KCTD8Q6ZWB6 473 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 HDDC2Q7Z4H3 204 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 TCEANCQ8N8B7 351 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 OR52E4Q8NGH9 312 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 CCDC107Q8WV48 283 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 GTF3AQ92664 365 aaKnown RBP4.2□□□□□ -1.74
NEK1-204ENST00000509912 TMEM186Q96B77 213 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 SLC41A3Q96GZ6 507 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 ZNF486Q96H40 463 aaPredicted RBP4.2□□□□□ -1.74
NEK1-204ENST00000509912 TMEM43Q9BTV4 400 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 ZNF416Q9BWM5 594 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 CENPMQ9NSP4 180 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 SMPD3Q9NY59 655 aaPredicted RBP4.2□□□□□ -1.74
NEK1-204ENST00000509912 ZNF224Q9NZL3 707 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 PROCRQ9UNN8 238 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 RNF11Q9Y3C5 154 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 CSMD1Q96PZ7 3565 aa4.2□□□□□ -1.74
NEK1-204ENST00000509912 SETD2Q9BYW2 2564 aaPredicted RBP4.2□□□□□ -1.74
NEK1-204ENST00000509912 FREM3P0C091 2139 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 J3QLI3 93 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 UBFD1O14562 309 aaKnown RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 AZIN1O14977 448 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 GMFGO60234 142 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 SUPT7LO94864 414 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 IGHMP01871 453 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 BMI1P35226 326 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 NR4A2P43354 598 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 OR3A3P47888 321 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 AP2S1P53680 142 aaPredicted RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 RAG2P55895 527 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 TSPAN5P62079 268 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 ZNF672Q499Z4 452 aaPredicted RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 LRRC37A5PQ49AS3 106 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 PRAMEF20Q5VT98 475 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 Q6ZSR9 355 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 TPRA1Q86W33 373 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 OR52B4Q8NGK2 314 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 ZMYND19Q96E35 227 aaPredicted RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 JSRP1Q96MG2 331 aaPredicted RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 ZNF583Q96ND8 569 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 THTPAQ9BU02 230 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 GPR61Q9BZJ8 451 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 NXF5Q9H1B4 397 aaKnown RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 GLIPR2Q9H4G4 154 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 TMEM38AQ9H6F2 299 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 MTHFD2LQ9H903 347 aaPredicted RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 EXD2Q9NVH0 621 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 GAGE12JA6NER3 117 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 SLC22A20A6NK97 555 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 EEF1E1-BLOC1S5C9J1V9 151 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 EEF1E1O43324 174 aaKnown RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 ZNF354AO60765 605 aaPredicted RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 TRMUO75648 421 aaKnown RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 SYNGR4O95473 234 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 APOC1P02654 83 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 OPN1MWP04001 364 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 CT62P0C5K7 136 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 OPN1MW2P0DN77 364 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 OPN1MW3P0DN78 364 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 UQCRBP14927 111 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 PGCP20142 388 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 RPS4XP62701 263 aaKnown RBP4.19□□□□□ -1.74
NEK1-204ENST00000509912 SLC35A1P78382 337 aa4.19□□□□□ -1.74
NEK1-204ENST00000509912 RGS21Q2M5E4 152 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms