RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, human

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX4-208	ENST00000508580	GCG	P01275	180 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	H2AFZ	P0C0S5	128 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	LIPC	P11150	499 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	NQO1	P15559	274 aa	Known RBP	3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	RAB4A	P20338	218 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	PRPS1L1	P21108	318 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	KIR3DL2	P43630	455 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	CBX5	P45973	191 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	OR1D4	P47884	311 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	GSK3B	P49841	420 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	CSRP3	P50461	194 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	HCCS	P53701	268 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	HMGCS1	Q01581	520 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	PRKCD	Q05655	676 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ST3GAL4	Q11206	333 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ASAH1	Q13510	395 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	RAB31	Q13636	194 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ARL6IP1	Q15041	203 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ZBED5	Q49AG3	693 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	MARCH8	Q5T0T0	291 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	TPTE2P1	Q5T6R2	138 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	PWWP2B	Q6NUJ5	590 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	NIPAL1	Q6NVV3	410 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	DRAM2	Q6UX65	266 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ACOT7L	Q6ZUV0	252 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	TMEM150A	Q86TG1	271 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	TMEM135	Q86UB9	458 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ZFAND4	Q86XD8	727 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	SLC13A5	Q86YT5	568 aa	Predicted RBP	3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	BBS7	Q8IWZ6	715 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	HS3ST5	Q8IZT8	346 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	CA13	Q8N1Q1	262 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580		Q8N402	240 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	FTMT	Q8N4E7	242 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	RAB42	Q8N4Z0	105 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ZNF564	Q8TBZ8	553 aa	Predicted RBP	3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	SFXN5	Q8TD22	340 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	MCOLN3	Q8TDD5	553 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	OR5P2	Q8WZ92	322 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	CNRIP1	Q96F85	164 aa	Predicted RBP	3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	DYNLL2	Q96FJ2	89 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	C18orf12	Q96KH6	178 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	PPP1R36	Q96LQ0	422 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ZNF681	Q96N22	645 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	MBOAT7	Q96N66	472 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	SCGB3A2	Q96PL1	93 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	GPR21	Q99679	349 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	CHIA	Q9BZP6	476 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	OR51B6	Q9H340	312 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	B3GAT2	Q9NPZ5	323 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	PRODH2	Q9UF12	536 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	SLC22A13	Q9Y226	551 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ASF1A	Q9Y294	204 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	SNX24	Q9Y343	169 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	STYXL1	Q9Y6J8	313 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	C4A	P0C0L4	1744 aa		3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	MKI67	P46013	3256 aa	Known RBP	3.01	□□□□□ -1.93
DDX4-208	ENST00000508580	ITGB4	P16144	1822 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	LTN1	O94822	1766 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	IGHV4-4	A0A075B6R2	117 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	IGHV3OR16-12	A0A075B7B8	117 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580		A0A0B4J2E0	115 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	ZNF816-ZNF321P	A0A0X1KG74	233 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580		A0A1B0GVI7	797 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580		A0A1B0GX12	115 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580		E5RI56	91 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580		H0Y980	276 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580		H3BQV1	296 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	NME4	O00746	187 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	HPGDS	O60760	199 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	MPZL1	O95297	269 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	RAB3D	O95716	219 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	RAB36	O95755	333 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	HLA-A	P01891	365 aa	Known RBP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	APOE	P02649	317 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	ARG1	P05089	322 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	HOXC4	P09017	264 aa	Predicted RBP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	RBMY1C	P0DJD4	496 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	ZNF35	P13682	527 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	HIST1H1C	P16403	213 aa	Known RBP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	RAB5A	P20339	215 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	MSN	P26038	577 aa	Known RBP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	GNRHR	P30968	328 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	SHMT2	P34897	504 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	CAPZB	P47756	277 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	RPL29	P47914	159 aa	Known RBP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	ALDH3B2	P48448	385 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	RAP1GDS1	P52306	607 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	SUB1	P53999	127 aa	Known RBP eCLIP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	CXCR4	P61073	352 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	ARF6	P62330	175 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	SLC25A11	Q02978	314 aa	Known RBP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	CKAP4	Q07065	602 aa	Known RBP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	STX4	Q12846	297 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	ELAVL2	Q12926	359 aa	Known RBP	3	□□□□□ -1.93
DDX4-208	ENST00000508580	TMED2	Q15363	201 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	RFX4	Q33E94	735 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	C2CD6	Q53TS8	623 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	PDZD11	Q5EBL8	140 aa		3	□□□□□ -1.93
DDX4-208	ENST00000508580	GCSAML	Q5JQS6	135 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms