RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SLC25A15Q9Y619 301 aa7.05□□□□□ -1.28
TOPBP1-202ENST00000503338 LOC400499M0QZD8 3231 aa7.05□□□□□ -1.28
TOPBP1-202ENST00000503338 ASPMQ8IZT6 3477 aa7.05□□□□□ -1.28
TOPBP1-202ENST00000503338 ZNF816-ZNF321PA0A0X1KG74 233 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 SMIM30A4D0T7 59 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 ZNF503-AS2A6NEH8 195 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 FAM25AB3EWG3 89 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 FAM25CB3EWG5 89 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 FAM25GB3EWG6 89 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 CCL21O00585 134 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 CTDSP2O14595 271 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 NCR1O76036 304 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 APOA1P02647 267 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 UBBP0CG47 229 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 PRF1P14222 555 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 ADRA2CP18825 462 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 ATF1P18846 271 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 HTR2CP28335 458 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 CHRNB4P30926 498 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 TNFSF8P32971 234 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 THBS2P35442 1172 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 GSK3AP49840 483 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 ASCL1P50553 236 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 IDH3GP51553 393 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 CAV3P56539 151 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 FAM3AP98173 230 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 HGFACQ04756 655 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 PPA1Q15181 289 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 UBE2NLQ5JXB2 153 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 C1orf100Q5SVJ3 147 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 CLVS2Q5SYC1 327 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 XKRXQ6PP77 449 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 NR2C2APQ86WQ0 139 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 DNAAF1Q8NEP3 725 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 TRMT10AQ8TBZ6 339 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 RAB40AQ8WXH6 277 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 PIGTQ969N2 578 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 PTX4Q96A99 478 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 DIRAS2Q96HU8 199 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 CCDC32Q9BV29 185 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 REPIN1Q9BWE0 567 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 ACTR6Q9GZN1 396 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 LIN7BQ9HAP6 207 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 NOX3Q9HBY0 568 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 GHRLQ9UBU3 117 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 KCNN3Q9UGI6 736 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 NOP16Q9Y3C1 178 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 SPEF1Q9Y4P9 236 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 ZFHX4Q86UP3 3567 aa7.04□□□□□ -1.28
TOPBP1-202ENST00000503338 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 FABP12A6NFH5 140 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 GGT3PA6NGU5 568 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 H3BSH0 61 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 ATXN7O15265 892 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 SMPD2O60906 423 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 SCGNO76038 276 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 CST4P01036 141 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 NRASP01111 189 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 HCKP08631 526 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 BMP4P12644 408 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 RAC2P15153 192 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 ZNF93P35789 620 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 NR4A2P43354 598 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 EVX1P49640 407 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 ART1P52961 327 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 UCP2P55851 309 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 ZNF92Q03936 586 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 SPOCK1Q08629 439 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 FBXL19-AS1Q494R0 122 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 HES5Q5TA89 166 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 TMEM42Q69YG0 159 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 FAM166AQ6J272 317 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 C16orf87Q6PH81 154 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 PCSK4Q6UW60 755 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 FBXW12Q6X9E4 464 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 LAX1Q8IWV1 398 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 MFSD4AQ8N468 514 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 JAGN1Q8N5M9 183 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 SAMD12Q8N8I0 201 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 GDPD1Q8N9F7 314 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 RELL2Q8NC24 303 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 GALNT11Q8NCW6 608 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 OR13C9Q8NGT0 318 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 OR2AE1Q8NHA4 323 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 S100PBPQ96BU1 408 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 ORAI1Q96D31 301 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 GFI1Q99684 422 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 ABCG5Q9H222 651 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 NGBQ9NPG2 151 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 PCDHB16Q9NRJ7 776 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 CYSLTR2Q9NS75 346 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 SLC7A11Q9UPY5 501 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 OSGIN2Q9Y236 505 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 TLN1Q9Y490 2541 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 POLEQ07864 2286 aa7.03□□□□□ -1.28
TOPBP1-202ENST00000503338 MGAQ8IWI9 3026 aa7.02□□□□□ -1.29
TOPBP1-202ENST00000503338 DMXL2Q8TDJ6 3036 aa7.02□□□□□ -1.29
TOPBP1-202ENST00000503338 TPRP12270 2363 aaKnown RBP7.02□□□□□ -1.29
TOPBP1-202ENST00000503338 A0A0A6YYH2 397 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms