RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 SOD3P08294 240 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 OCM2P0CE71 109 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 BMP4P12644 408 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 ZNF14P17017 642 aaPredicted RBP13.94□□□□□ -0.18
LMNA-217ENST00000498722 RAB3BP20337 219 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 KIR3DL2P43630 455 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 MMP16P51512 607 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 GALK2Q01415 458 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 FAM27BQ5VT28 67 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 AGAP6Q5VW22 663 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 KCTD12Q96CX2 325 aaKnown RBP13.94□□□□□ -0.18
LMNA-217ENST00000498722 WDFY2Q96P53 400 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 DERL3Q96Q80 235 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 FOXC2Q99958 501 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 ZNF416Q9BWM5 594 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 ASH2LQ9UBL3 628 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 OR52A1Q9UKL2 312 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 GTF2A1LQ9UNN4 478 aa13.94□□□□□ -0.18
LMNA-217ENST00000498722 TMEM269A0A1B0GVZ9 245 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 SHISA3A0PJX4 238 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 RGS5O15539 181 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 SERPINA5P05154 406 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 CST2P09228 141 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 DANCRP0C864 163 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 UBCP0CG48 685 aaKnown RBP13.93□□□□□ -0.18
LMNA-217ENST00000498722 ZNF32P17041 273 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 CD40LGP29965 261 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 ETV6P41212 452 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 SNTB2Q13425 540 aaKnown RBP13.93□□□□□ -0.18
LMNA-217ENST00000498722 ENDOGQ14249 297 aaKnown RBP13.93□□□□□ -0.18
LMNA-217ENST00000498722 PABPC1L2AQ5JQF8 200 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 SPANXN2Q5MJ10 180 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 DDI2Q5TDH0 399 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 TMEM244Q5VVB8 128 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 CFAP77Q6ZQR2 320 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 MUC15Q8N387 334 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 SLC30A7Q8NEW0 376 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 RGP1Q92546 391 aaPredicted RBP13.93□□□□□ -0.18
LMNA-217ENST00000498722 FBXO17Q96EF6 278 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 CDH20Q9HBT6 801 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 NOX4Q9NPH5 578 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 CA10Q9NS85 328 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 ADAM30Q9UKF2 790 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 SPEF1Q9Y4P9 236 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 ITPR3Q14573 2671 aa13.93□□□□□ -0.18
LMNA-217ENST00000498722 CHD3Q12873 2000 aaKnown RBP13.93□□□□□ -0.18
LMNA-217ENST00000498722 ANKRD61A6NGH8 418 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 PNPP00491 289 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 APOC1P02654 83 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 ISG15P05161 165 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 CCL2P13500 99 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 SRMP19623 302 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 ACHEP22303 614 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 CCNOP22674 350 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 APOBEC3AP31941 199 aaPredicted RBP13.92□□□□□ -0.18
LMNA-217ENST00000498722 APLNRP35414 380 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 CDKN1AP38936 164 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 PSMA6P60900 246 aaKnown RBP13.92□□□□□ -0.18
LMNA-217ENST00000498722 PCBD1P61457 104 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 PPP3R1P63098 170 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 HIST1H3AP68431 136 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 MFGE8Q08431 387 aaPredicted RBP13.92□□□□□ -0.18
LMNA-217ENST00000498722 TBC1D28Q2M2D7 210 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 FAM27D1Q5T7N8 215 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 BCL2L15Q5TBC7 163 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 HIST2H3PS2Q5TEC6 136 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 C16orf87Q6PH81 154 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 HIST2H3AQ71DI3 136 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 SYT9Q86SS6 491 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 ZNF584Q8IVC4 421 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 MFSD4AQ8N468 514 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 OR10S1Q8NGN2 331 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 AKR7LQ8NHP1 331 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 TSEN15Q8WW01 171 aaKnown RBP13.92□□□□□ -0.18
LMNA-217ENST00000498722 ZNF75AQ96N20 296 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 PPIL3Q9H2H8 161 aaKnown RBP13.92□□□□□ -0.18
LMNA-217ENST00000498722 OR51B6Q9H340 312 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 TCF7L1Q9HCS4 588 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 G6PC2Q9NQR9 355 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 CELSR1Q9NYQ6 3014 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 MED13LQ71F56 2210 aa13.92□□□□□ -0.18
LMNA-217ENST00000498722 ACOD1A6NK06 481 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 NOTOA8MTQ0 251 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 VSTM5A8MXK1 200 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 CTDSP2O14595 271 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 CD2P06729 351 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 MMP7P09237 267 aaPredicted RBP13.91□□□□□ -0.18
LMNA-217ENST00000498722 APEX1P27695 318 aaKnown RBP13.91□□□□□ -0.18
LMNA-217ENST00000498722 PPP5CP53041 499 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 CAV3P56539 151 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 NKX6-1P78426 367 aaPredicted RBP13.91□□□□□ -0.18
LMNA-217ENST00000498722 HGFACQ04756 655 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 SCRN3Q0VDG4 424 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 SFXN4Q6P4A7 337 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 CCDC190Q86UF4 302 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 OR1J2Q8NGS2 313 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 KCNJ15Q99712 375 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 ATF6BQ99941 703 aa13.91□□□□□ -0.18
LMNA-217ENST00000498722 TRAF4Q9BUZ4 470 aaPredicted RBP13.91□□□□□ -0.18
LMNA-217ENST00000498722 PNRC2Q9NPJ4 139 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms