RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SNTB1	Q13884	538 aa	Known RBP	11.65	□□□□□ -0.54
APTX-231	ENST00000494973	ACSM3	Q53FZ2	586 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	SATL1	Q86VE3	508 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	SERPINA12	Q8IW75	414 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	PIGT	Q969N2	578 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	TMEM203	Q969S6	136 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	TMEM106A	Q96A25	262 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	MRPL24	Q96A35	216 aa	Known RBP	11.65	□□□□□ -0.54
APTX-231	ENST00000494973	FUNDC2	Q9BWH2	189 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	MRPL15	Q9P015	296 aa	Known RBP	11.65	□□□□□ -0.54
APTX-231	ENST00000494973	ZNF319	Q9P2F9	582 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	RTTN	Q86VV8	2226 aa		11.65	□□□□□ -0.54
APTX-231	ENST00000494973	PRR14L	Q5THK1	2151 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	FLNC	Q14315	2725 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	PLSCR5	A0PG75	271 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	CD300LB	A8K4G0	201 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	IQCF6	A8MYZ5	107 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	SHISA9	B4DS77	424 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	GABRP	O00591	440 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	TIMM8A	O60220	97 aa	Predicted RBP	11.64	□□□□□ -0.55
APTX-231	ENST00000494973	SC5D	O75845	299 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	GABARAP	O95166	117 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	RPS11	P62280	158 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
APTX-231	ENST00000494973	FABP5	Q01469	135 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	SPOCK1	Q08629	439 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	DOC2B	Q14184	412 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	CNN3	Q15417	329 aa	Known RBP	11.64	□□□□□ -0.55
APTX-231	ENST00000494973	ZNF672	Q499Z4	452 aa	Predicted RBP	11.64	□□□□□ -0.55
APTX-231	ENST00000494973	HSD17B12	Q53GQ0	312 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	UTS2B	Q765I0	119 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	KRT74	Q7RTS7	529 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	CEACAM19	Q7Z692	300 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	PARP16	Q8N5Y8	322 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	KBTBD8	Q8NFY9	601 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	OR56B2P	Q8NGI1	322 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	OR5D14	Q8NGL3	314 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	OR14K1	Q8NGZ2	314 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	TMEM171	Q8WVE6	324 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	RGP1	Q92546	391 aa	Predicted RBP	11.64	□□□□□ -0.55
APTX-231	ENST00000494973	CMBL	Q96DG6	245 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	LYZL4	Q96KX0	146 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	KCTD7	Q96MP8	289 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	DERL3	Q96Q80	235 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	OR14A2	Q96R54	314 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	DHRS9	Q9BPW9	319 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	CHST5	Q9GZS9	411 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	FAM192A	Q9GZU8	254 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	PLK3	Q9H4B4	646 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	PURG	Q9UJV8	347 aa	Known RBP	11.64	□□□□□ -0.55
APTX-231	ENST00000494973	PIGL	Q9Y2B2	252 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	MPC1	Q9Y5U8	109 aa		11.64	□□□□□ -0.55
APTX-231	ENST00000494973	CAD	P27708	2225 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	IGLV3-9	A0A075B6K5	115 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	TRBV5-7	A0A0A0MS05	114 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.63	□□□□□ -0.55
APTX-231	ENST00000494973		A0A1W2PPW3	197 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	MEGF11	A6BM72	1044 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	ANXA2P2	A6NMY6	339 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	SLC22A1	O15245	554 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	ALX3	O95076	343 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	CST4	P01036	141 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	IGHV3-13	P01766	116 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	UCHL1	P09936	223 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	OCM	P0CE72	109 aa	Predicted RBP	11.63	□□□□□ -0.55
APTX-231	ENST00000494973	BMP4	P12644	408 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	GADD45A	P24522	165 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	APOBEC3A	P31941	199 aa	Predicted RBP	11.63	□□□□□ -0.55
APTX-231	ENST00000494973	CRYBB2	P43320	205 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	PSMD7	P51665	324 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	EFNB3	Q15768	340 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	CLVS2	Q5SYC1	327 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	SPATA46	Q5T0L3	261 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	GPR107	Q5VW38	600 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	VHLL	Q6RSH7	139 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	UNQ9370/PRO34162	Q6UXP9	181 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.63	□□□□□ -0.55
APTX-231	ENST00000494973	RDH10	Q8IZV5	341 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	FBXL14	Q8N1E6	418 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	NKAIN3	Q8N8D7	197 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	SPERT	Q8NA61	448 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	FBXW5	Q969U6	566 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	PPP1R14A	Q96A00	147 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	TMIGD2	Q96BF3	282 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	CHCHD6	Q9BRQ6	235 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	TCF7L1	Q9HCS4	588 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	FOXJ3	Q9UPW0	622 aa		11.63	□□□□□ -0.55
APTX-231	ENST00000494973	LOC100506127	A0A0U1RQW1	187 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	CCDC160	A6NGH7	325 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	ANKRD61	A6NGH8	418 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973		B9A039	149 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	PDCD5	O14737	125 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	MAGEB3	O15480	346 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	GPX5	O75715	221 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	RAB3A	P20336	220 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	PRKACB	P22694	351 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	LOX	P28300	417 aa	Predicted RBP	11.62	□□□□□ -0.55
APTX-231	ENST00000494973	SERPINF1	P36955	418 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	SOX2	P48431	317 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	FABP6	P51161	128 aa		11.62	□□□□□ -0.55
APTX-231	ENST00000494973	PSG7	Q13046	419 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms