RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 Q8NFD4 153 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 OR4M2Q8NGB6 313 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 OR52N4Q8NGI2 321 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 AKR7LQ8NHP1 331 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 C15orf40Q8WUR7 153 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 CHAC2Q8WUX2 184 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 SMIM4Q8WVI0 70 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 DEDD2Q8WXF8 326 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 EXTL1Q92935 676 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 YIPF5Q969M3 257 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 POM121Q96HA1 1249 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 PGAM5Q96HS1 289 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 SORCS2Q96PQ0 1159 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 TRIB1Q96RU8 372 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 OBP2BQ9NPH6 170 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 BRD7Q9NPI1 651 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 FAIMQ9NVQ4 179 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 RHBDL2Q9NX52 303 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 EXTL2Q9UBQ6 330 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 GHRLQ9UBU3 117 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 RAXQ9Y2V3 346 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 PTPRQQ9UMZ3 2332 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 CACNA1AO00555 2505 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 TMEM272A0A1B0GTI8 110 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 A0A1W2PQ09 198 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 FIGNL2A6NMB9 653 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 FOXI3A8MTJ6 420 aaPredicted RBP5.88□□□□□ -1.47
MSH5-217ENST00000494458 XRCC2O43543 280 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 LANCL1O43813 399 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 CTAG2O75638 210 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 KRT33AO76009 404 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 BPNT1O95861 308 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 CST4P01036 141 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 IGLV1-44P01699 117 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 HLA-HP01893 362 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 MELTFP08582 738 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 EDN3P14138 238 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 CBR1P16152 277 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 TUBG1P23258 451 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 STOMP27105 288 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 HTR5AP47898 357 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 POU3F4P49335 361 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 CLDN12P56749 244 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 PITPNAQ00169 270 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 ZNF92Q03936 586 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 RIPPLY1Q0D2K3 151 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 FOXF2Q12947 444 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 PLA2G7Q13093 441 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 RAB11BQ15907 218 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 TBRG1Q3YBR2 411 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 GLYATL3Q5SZD4 288 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 C1orf185Q5T7R7 199 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 TMEM53Q6P2H8 277 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 VWA1Q6PCB0 445 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 OR2W3Q7Z3T1 314 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 DOLPP1Q86YN1 238 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 OR51D1Q8NGF3 324 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 OR4D6Q8NGJ1 314 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 OR5M9Q8NGP3 310 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 SYNPRQ8TBG9 265 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 UBASH3BQ8TF42 649 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 PIGTQ969N2 578 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 APOBEC3DQ96AK3 386 aaPredicted RBP5.88□□□□□ -1.47
MSH5-217ENST00000494458 SPSB1Q96BD6 273 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 S100A16Q96FQ6 103 aaKnown RBP5.88□□□□□ -1.47
MSH5-217ENST00000494458 REEP6Q96HR9 211 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 TECTBQ96PL2 329 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 THAP7Q9BT49 309 aaPredicted RBP5.88□□□□□ -1.47
MSH5-217ENST00000494458 PRORYQ9H606 182 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 OPA3Q9H6K4 179 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 CNTD2Q9H8S5 307 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 TUBG2Q9NRH3 451 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 ABCB10Q9NRK6 738 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 C14orf119Q9NWQ9 140 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 JKAMPQ9P055 326 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 RAB22AQ9UL26 194 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 GTF2A1LQ9UNN4 478 aa5.88□□□□□ -1.47
MSH5-217ENST00000494458 SPTBN4Q9H254 2564 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 A0A096LPE4 126 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 A0A1B0GWJ7 208 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 A0A1W2PPZ6 126 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 WIPF3A6NGB9 483 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 GGT3PA6NGU5 568 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 FAM25AB3EWG3 89 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 FAM25CB3EWG5 89 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 FAM25GB3EWG6 89 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 GABARAPH6UMI1 98 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 RAB27BO00194 218 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 SULT1C2O00338 296 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ZNHIT1O43257 154 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 GMDSO60547 372 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 LCATP04180 440 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 UBBP0CG47 229 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 VSIG8P0DPA2 414 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 GLI4P10075 376 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ZNF35P13682 527 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 ARSBP15848 533 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 PSMB1P20618 241 aaKnown RBP5.87□□□□□ -1.47
MSH5-217ENST00000494458 CDK2P24941 298 aa5.87□□□□□ -1.47
MSH5-217ENST00000494458 OPRM1P35372 400 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms