RNA–Protein interactions for RNA: ENST00000494276.1

ZNF561-219, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-219ENST00000494276 RAG2P55895 527 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 CLDN15P56746 228 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 MAXP61244 160 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 RANP62826 216 aaKnown RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 GNA12Q03113 381 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 BAXQ07812 192 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 FABP9Q0Z7S8 132 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 ST3GAL3Q11203 375 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 ELAVL2Q12926 359 aaKnown RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 RBM39Q14498 530 aaKnown RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 RSU1Q15404 277 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 NEDD8Q15843 81 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 ZNF74Q16587 644 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 ISXQ2M1V0 245 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 GLYR1Q49A26 553 aaPredicted RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 PYCR3Q53H96 274 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 FAM78BQ5VT40 261 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 PWWP2BQ6NUJ5 590 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 NIPAL3Q6P499 406 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 CBLN3Q6UW01 205 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 ATRAIDQ6UW56 229 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 RNF165Q6ZSG1 346 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 Q6ZSR9 355 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 OLIG3Q7RTU3 272 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 PTAR1Q7Z6K3 402 aaPredicted RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 CPNE9Q8IYJ1 553 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 DHRSXQ8N5I4 330 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 TCEANCQ8N8B7 351 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 CDRT4Q8N9R6 151 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 ADAD2Q8NCV1 583 aaKnown RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 B3GNT7Q8NFL0 401 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 OR4M2Q8NGB6 313 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 OR9Q2Q8NGE9 314 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 OR5AP2Q8NGF4 316 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 OR4P4Q8NGL7 312 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 OR10G8Q8NGN5 311 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 OR52E5Q8NH55 327 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 RPLP0P6Q8NHW5 317 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 SMAP2Q8WU79 429 aaPredicted RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 MRPS31Q92665 395 aaKnown RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 RCN3Q96D15 328 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 SMARCD1Q96GM5 515 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 GMPPAQ96IJ6 420 aaPredicted RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 BTF3L4Q96K17 158 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 C12orf42Q96LP6 360 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 TNFRSF13CQ96RJ3 184 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 COPS8Q99627 209 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 SDHCQ99643 169 aaPredicted RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 SULT4A1Q9BR01 284 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 TRIM51Q9BSJ1 452 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 TLNRD1Q9H1K6 362 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 TXNIPQ9H3M7 391 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 DSN1Q9H410 356 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 ALG9Q9H6U8 611 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 FGF22Q9HCT0 170 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 ZNF71Q9NQZ8 489 aaPredicted RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 CLN6Q9NWW5 311 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 TMEM216Q9P0N5 145 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 VPS29Q9UBQ0 182 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 TFR2Q9UP52 801 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 CSDC2Q9Y534 153 aaKnown RBP3.1□□□□□ -1.91
ZNF561-219ENST00000494276 V9GYY9 64 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 CNTNAP1P78357 1384 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 TRAPPC8Q9Y2L5 1435 aa3.1□□□□□ -1.91
ZNF561-219ENST00000494276 PCF11O94913 1555 aaKnown RBP3.09□□□□□ -1.91
ZNF561-219ENST00000494276 LOC105371242A0A075B767 164 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 KBTBD11-OT1A0A1B0GTJ5 212 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 A0A1W2PRD5 423 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 IGSF23A1L1A6 192 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 TRAPPC13A5PLN9 417 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 OR5H14A6NHG9 310 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 SLC22A20A6NK97 555 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 H3BMQ9 156 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 LATO43561 262 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 HPGDSO60760 199 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 ENTPD6O75354 484 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 ANXA9O76027 345 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 CPNE6O95741 557 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 C6orf47O95873 294 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 APOC3P02656 99 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 GYPCP04921 128 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 BCHEP06276 602 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 DCNP07585 359 aaKnown RBP3.09□□□□□ -1.91
ZNF561-219ENST00000494276 GIPP09681 153 aaPredicted RBP3.09□□□□□ -1.91
ZNF561-219ENST00000494276 CSF3P09919 207 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 GP1BBP13224 206 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 HIST1H1CP16403 213 aaKnown RBP3.09□□□□□ -1.91
ZNF561-219ENST00000494276 ZNF14P17017 642 aaPredicted RBP3.09□□□□□ -1.91
ZNF561-219ENST00000494276 AADACP22760 399 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 KDELR1P24390 212 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 PSMB4P28070 264 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 SRD5A2P31213 254 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 TIA1P31483 386 aaKnown RBP eCLIP3.09□□□□□ -1.91
ZNF561-219ENST00000494276 MDH2P40926 338 aaKnown RBP3.09□□□□□ -1.91
ZNF561-219ENST00000494276 HMGCS2P54868 508 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 CLDN17P56750 224 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 TPI1P60174 286 aa3.09□□□□□ -1.91
ZNF561-219ENST00000494276 GNB1P62873 340 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms