RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 VSIG10L2P0DP72 767 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 CEACAM1P13688 526 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 GABRA1P14867 456 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 CRYGSP22914 178 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ITGA3P26006 1051 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 GDF1P27539 372 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ALDH3B1P43353 468 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 SOX2P48431 317 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 SELENOPP49908 381 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF84P51523 738 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ART1P52961 327 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 HGFACQ04756 655 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ECH1Q13011 328 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 GPR176Q14439 515 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 RAB11BQ15907 218 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 RSPO1Q2MKA7 263 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 CCDC92Q53HC0 331 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ELFN2Q5R3F8 820 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 PHYHD1Q5SRE7 291 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 OLFML2AQ68BL7 652 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 GLT8D1Q68CQ7 371 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 CORO6Q6QEF8 472 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 KLHL24Q6TFL4 600 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF813Q6ZN06 617 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 FCRLAQ7L513 359 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 KRT74Q7RTS7 529 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 TMEM251Q8N6I4 163 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF433Q8N7K0 673 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 OR8B12Q8NGG6 310 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 OR6N1Q8NGY5 312 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF671Q8TAW3 534 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 TSEN15Q8WW01 171 aaKnown RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 CFHR4Q92496 578 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 CREB3L1Q96BA8 519 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 FAM3DQ96BQ1 224 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ORAI1Q96D31 301 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 S100A16Q96FQ6 103 aaKnown RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 JSRP1Q96MG2 331 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 NEDD4LQ96PU5 975 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 VRK1Q99986 396 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF416Q9BWM5 594 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 TTTY12Q9BZ98 90 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ULBP2Q9BZM5 246 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 HDHD2Q9H0R4 259 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 SLC6A15Q9H2J7 730 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ZDHHC11Q9H8X9 412 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 RNF121Q9H920 327 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 BCO1Q9HAY6 547 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 TMEM38BQ9NVV0 291 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 EMC3Q9P0I2 261 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 COPZ2Q9P299 210 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 MALT1Q9UDY8 824 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF107Q9UII5 783 aaPredicted RBP4.85□□□□□ -1.63
ATG4A-208ENST00000489247 SDK2Q58EX2 2172 aa4.85□□□□□ -1.63
ATG4A-208ENST00000489247 IGHV3-15A0A0B4J1V0 119 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 A0A0B4J293 547 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 A0A1B0GVI7 797 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 SPAARA0A1B0GVQ0 90 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 ANKRD20A5PA0PJZ0 165 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 MEIOCA2RUB1 952 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 C7orf66A4D0T2 115 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 OR6C6A6NF89 314 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 NAP1L6A6NFF2 107 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 GGT3PA6NGU5 568 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 HMX3A6NHT5 357 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 H0YC42 278 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 KLRC4-KLRK1H3BQV0 150 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 P2RY10O00398 339 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 RER1O15258 196 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 EEF1E1O43324 174 aaKnown RBP4.84□□□□□ -1.63
ATG4A-208ENST00000489247 SYT7O43581 403 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 SYNGR3O43761 229 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 DOK2O60496 412 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 CTAG2O75638 210 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 SCGNO76038 276 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 ECDO95905 644 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-208ENST00000489247 IGHG3P01860 377 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 ERCC1P07992 297 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-208ENST00000489247 PRF1P14222 555 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 CPN1P15169 458 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 TCEA1P23193 301 aaKnown RBP4.84□□□□□ -1.63
ATG4A-208ENST00000489247 CDK2P24941 298 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 HTR2CP28335 458 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 CDAP32320 146 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 GUCA1AP43080 201 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-208ENST00000489247 POU3F4P49335 361 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 ZNF121P58317 390 aaPredicted RBP4.84□□□□□ -1.63
ATG4A-208ENST00000489247 TAS2R20P59543 309 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 AP3S2P59780 193 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 QRFPP83859 136 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 DGCR2P98153 550 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 SCRN3Q0VDG4 424 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 ICAM4Q14773 271 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 RAB35Q15286 201 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 TAB1Q15750 504 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 HES5Q5TA89 166 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 OTPQ5XKR4 325 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 PGAP1Q75T13 922 aa4.84□□□□□ -1.63
ATG4A-208ENST00000489247 UTS2BQ765I0 119 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms