RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TNFAIP8O95379 198 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 LALBAP00709 142 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 TTRP02766 147 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 SOD3P08294 240 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 OR4A8P0C604 315 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 PSMB9P28065 219 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 PCSK6P29122 969 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 OTX1P32242 354 aaPredicted RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 TTKP33981 857 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 SERPINF1P36955 418 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 CDKN1AP38936 164 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 ALDH3B1P43353 468 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 KIR3DL2P43630 455 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 SOX2P48431 317 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 WNT4P56705 351 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 KLF3P57682 345 aaPredicted RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 NANOS3P60323 173 aaKnown RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 GABARAPL2P60520 117 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 NKX6-1P78426 367 aaPredicted RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 ZNF92Q03936 586 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 ALKBH1Q13686 389 aaKnown RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 GK2Q14410 553 aaPredicted RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 NEDD8Q15843 81 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 ADIPOQQ15848 244 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 NKPD1Q17RQ9 610 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 KRTAP27-1Q3LI81 207 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 ZNF684Q5T5D7 378 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 XAF1Q6GPH4 301 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 ZNF773Q6PK81 442 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 PRSS48Q7RTY5 328 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 KCTD20Q7Z5Y7 419 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 CATSPERDQ86XM0 798 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 ZCCHC24Q8N2G6 241 aaKnown RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 SYS1Q8N2H4 156 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 MUC15Q8N387 334 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 PRSS35Q8N3Z0 413 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 NUP37Q8NFH4 326 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 OR2G2Q8NGZ5 317 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 OR52N1Q8NH53 320 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 TMEM171Q8WVE6 324 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 PIGCQ92535 297 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 GTF3AQ92664 365 aaKnown RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 DVL3Q92997 716 aaPredicted RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 MRPL24Q96A35 216 aaKnown RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 SGK3Q96BR1 496 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 C14orf79Q96F83 325 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 MARS2Q96GW9 593 aaKnown RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 LYZL4Q96KX0 146 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 COG8Q96MW5 612 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 CCL19Q99731 98 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 VRK1Q99986 396 aaPredicted RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 PDCD1LG2Q9BQ51 273 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 ZNF649Q9BS31 505 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 YTHDF1Q9BYJ9 559 aaKnown RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 COMMD4Q9H0A8 199 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 TPK1Q9H3S4 243 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 DUSP21Q9H596 190 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 MSL2Q9HCI7 577 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 G6PC2Q9NQR9 355 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 GPR84Q9NQS5 396 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 BABAM2Q9NXR7 383 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 PURGQ9UJV8 347 aaKnown RBP4.82□□□□□ -1.64
COPS3-208ENST00000486032 PLEKHA6Q9Y2H5 1048 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 MAST4O15021 2626 aa4.82□□□□□ -1.64
COPS3-208ENST00000486032 CACNA1DQ01668 2161 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 ZNF469Q96JG9 3925 aaPredicted RBP4.81□□□□□ -1.64
COPS3-208ENST00000486032 TEX15Q9BXT5 2789 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 LOC100289279A0A1B0GTE1 492 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 LOC107986453A0A1B0GWG9 222 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 TMEM129A0AVI4 362 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 PLSCR5A0PG75 271 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 FAM221AA4D161 298 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 SYT7O43581 403 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 LMX1BO60663 402 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 SRSF10O75494 262 aaKnown RBP4.81□□□□□ -1.64
COPS3-208ENST00000486032 GOSR1O95249 250 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 HLA-DPB1P04440 258 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 MED14OSP0DP75 135 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 NAT2P11245 290 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 CELP19835 753 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 RAB6AP20340 208 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 DCTDP32321 178 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 MAGEB1P43366 347 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 SNRPD2P62316 118 aaKnown RBP4.81□□□□□ -1.64
COPS3-208ENST00000486032 FAM3AP98173 230 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 EMX1Q04741 257 aaPredicted RBP4.81□□□□□ -1.64
COPS3-208ENST00000486032 PSG7Q13046 419 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 IRF3Q14653 427 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 CDK5R1Q15078 307 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 SPHARQ15513 63 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 TSTQ16762 297 aaKnown RBP4.81□□□□□ -1.64
COPS3-208ENST00000486032 KCTD21Q4G0X4 260 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 DMRTC1Q5HYR2 192 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 TMEM255AQ5JRV8 349 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 AGAP6Q5VW22 663 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 RPL22L1Q6P5R6 122 aaKnown RBP4.81□□□□□ -1.64
COPS3-208ENST00000486032 COLCA1Q6ZS62 124 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 KCTD8Q6ZWB6 473 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 MOB3CQ70IA8 216 aa4.81□□□□□ -1.64
COPS3-208ENST00000486032 RHOUQ7L0Q8 258 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms