RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 EXOSC8Q96B26 276 aaKnown RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF689Q96CS4 500 aaPredicted RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 SFRP2Q96HF1 295 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 AGAP4Q96P64 663 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TSSK2Q96PF2 358 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 OR2V2Q96R30 315 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 OR4K3Q96R72 315 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TSNAXQ99598 290 aaKnown RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 SDHCQ99643 169 aaPredicted RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TIMP4Q99727 224 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 RHNO1Q9BSD3 238 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 NDUFAF3Q9BU61 184 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ELOVL1Q9BW60 279 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MND1Q9BWT6 205 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 CDCP1Q9H5V8 836 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 DDX31Q9H8H2 851 aaKnown RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 SFXN1Q9H9B4 322 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 SLC25A19Q9HC21 320 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ZNF334Q9HCZ1 680 aaPredicted RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ISYNA1Q9NPH2 558 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ACER3Q9NUN7 267 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 MRTO4Q9UKD2 239 aaKnown RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 STUB1Q9UNE7 303 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 TP53TG5Q9Y2B4 290 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 LSM2Q9Y333 95 aaKnown RBP3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 GOLT1BQ9Y3E0 138 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ASB4Q9Y574 426 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 INSL5Q9Y5Q6 135 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ALG5Q9Y673 324 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 ENPP4Q9Y6X5 453 aa3.53□□□□□ -1.84
PRPF38B-205ENST00000485810 PLXNA2O75051 1894 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 A0A1B0GV90 55 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 A0A1W2PRG6 482 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 FAM172BPA6NC97 362 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 TMEM8BA6NDV4 472 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 GJE1A6NN92 205 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 FAM25AB3EWG3 89 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 FAM25CB3EWG5 89 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 FAM25GB3EWG6 89 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 NEDD8-MDP1E9PL57 170 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 H3BTX0 84 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 M0QZ24 198 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 DCTN6O00399 190 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CDIPTO14735 213 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 SOX30O94993 753 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 DIRAS1O95057 198 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 LRATO95237 230 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 C1orf105O95561 183 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CPSF4O95639 269 aaKnown RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 PTHP01270 115 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 HLA-HP01893 362 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 HLA-DQA2P01906 255 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 C1QCP02747 245 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 ORM1P02763 201 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 ALDOBP05062 364 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 S100A8P05109 93 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CD5P06127 495 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 C1GALT1C1LP0DN25 315 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 ERGP11308 486 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 EPCAMP16422 314 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CELP19835 753 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 TBXA2RP21731 343 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 MPZP25189 248 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CX3CR1P49238 355 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CRISP1P54107 249 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 RAG2P55895 527 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 TPTEP56180 551 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 SMIM11AP58511 58 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 OR2B8PP59922 312 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 RAB2AP61019 212 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 LSM3P62310 102 aaKnown RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 HBA1P69905 142 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CDK6Q00534 326 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 TLE4Q04727 773 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 PUDPQ08623 228 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CD300CQ08708 224 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 ST3GAL4Q11206 333 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 MLLT11Q13015 90 aaPredicted RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 GPR50Q13585 617 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 DNASE1L3Q13609 305 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 IRF4Q15306 451 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 SSX1Q16384 188 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 DUSP6Q16828 381 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 PRAMEF17Q5VTA0 474 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 TMEM268Q5VZI3 342 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 SAXO2Q658L1 398 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 C12orf73Q69YU5 71 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF474Q6S9Z5 364 aaPredicted RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF841Q6ZN19 808 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 ZNF836Q6ZNA1 936 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CPEB2Q7Z5Q1 589 aaKnown RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 WDFY1Q8IWB7 410 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 IZUMO1Q8IYV9 350 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 RNF113BQ8IZP6 322 aaKnown RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 MUC20Q8N307 709 aaPredicted RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 GALNT16Q8N428 558 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 C2orf73Q8N5S3 287 aaPredicted RBP3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 CLDN22Q8N7P3 220 aa3.52□□□□□ -1.85
PRPF38B-205ENST00000485810 ARL14EPQ8N8R7 260 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms