RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ST6GALNAC6Q969X2 333 aa9.28□□□□□ -0.92
USP11-208ENST00000480104 NABP2Q9BQ15 211 aa9.28□□□□□ -0.92
USP11-208ENST00000480104 RAB17Q9H0T7 212 aa9.28□□□□□ -0.92
USP11-208ENST00000480104 WDR13Q9H1Z4 485 aa9.28□□□□□ -0.92
USP11-208ENST00000480104 C14orf119Q9NWQ9 140 aa9.28□□□□□ -0.92
USP11-208ENST00000480104 SRRM2Q9UQ35 2752 aaKnown RBP9.28□□□□□ -0.92
USP11-208ENST00000480104 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.27□□□□□ -0.93
USP11-208ENST00000480104 H3BSH0 61 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 H7C1C5 153 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 OR2F2O95006 317 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
USP11-208ENST00000480104 GRK5P34947 590 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 NME5P56597 212 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 LCN6P62502 163 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 MALLQ13021 153 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 PCLAFQ15004 111 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 ZNF770Q6IQ21 691 aaPredicted RBP9.27□□□□□ -0.93
USP11-208ENST00000480104 Q8N1Y9 231 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 TMEM185AQ8NFB2 350 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 FNDC8Q8TC99 324 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 VPS33AQ96AX1 596 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 PPP1R36Q96LQ0 422 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 RAB3IPQ96QF0 476 aaPredicted RBP9.27□□□□□ -0.93
USP11-208ENST00000480104 MCHR1Q99705 422 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 EVA1AQ9H8M9 152 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 MEPEQ9NQ76 525 aaPredicted RBP9.27□□□□□ -0.93
USP11-208ENST00000480104 THUMPD1Q9NXG2 353 aaKnown RBP9.27□□□□□ -0.93
USP11-208ENST00000480104 LINC00527Q9UJ94 153 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 LRP12Q9Y561 859 aa9.27□□□□□ -0.93
USP11-208ENST00000480104 SIRT4Q9Y6E7 314 aaPredicted RBP9.27□□□□□ -0.93
USP11-208ENST00000480104 A0A087WUV0 522 aaPredicted RBP9.26□□□□□ -0.93
USP11-208ENST00000480104 CXorf65A6NEN9 183 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 CPSF4LA6NMK7 179 aaKnown RBP9.26□□□□□ -0.93
USP11-208ENST00000480104 M0R3H8 397 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 RFXANKO14593 260 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 ACAA1P09110 424 aaPredicted RBP9.26□□□□□ -0.93
USP11-208ENST00000480104 ALDOCP09972 364 aaKnown RBP9.26□□□□□ -0.93
USP11-208ENST00000480104 CTLA4P16410 223 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 POU3F4P49335 361 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 RPL27P61353 136 aaKnown RBP9.26□□□□□ -0.93
USP11-208ENST00000480104 SPIBQ01892 262 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 DYNC1I2Q13409 638 aaKnown RBP9.26□□□□□ -0.93
USP11-208ENST00000480104 PMS2P11Q13670 270 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 RSPO1Q2MKA7 263 aaPredicted RBP9.26□□□□□ -0.93
USP11-208ENST00000480104 GTDC1Q4AE62 458 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 TMEM200BQ69YZ2 307 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 DPY19L4Q7Z388 723 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 LYPD6Q86Y78 171 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 COMMD1Q8N668 190 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 ZNRF1Q8ND25 227 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 RBM14Q96PK6 669 aaKnown RBP9.26□□□□□ -0.93
USP11-208ENST00000480104 OR52E6Q96RD3 313 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 COQ7Q99807 217 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 TPT1P8Q9HAU6 139 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 USE1Q9NZ43 259 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 SLC7A7Q9UM01 511 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 SAR1BQ9Y6B6 198 aa9.26□□□□□ -0.93
USP11-208ENST00000480104 APOBP04114 4563 aaKnown RBP9.25□□□□□ -0.93
USP11-208ENST00000480104 hCG_1809904A0A1W2PP81 198 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 A0A1W2PPE2 198 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 A0A1W2PR64 198 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 A0A1W2PRV1 198 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 C5orf58C9J3I9 102 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 TRIM13O60858 407 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 SAP30O75446 220 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 OR7A10O76100 309 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 ACSM4P0C7M7 580 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 IGHV1-8P0DP01 117 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 FUT1P19526 365 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 NAA10P41227 235 aaPredicted RBP9.25□□□□□ -0.93
USP11-208ENST00000480104 RPL31P62899 125 aaKnown RBP9.25□□□□□ -0.93
USP11-208ENST00000480104 MXRA7P84157 204 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 MZT1Q08AG7 82 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 LAPTM4AQ15012 233 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 ACP7Q6ZNF0 438 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 CFAP77Q6ZQR2 320 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 SGPP2Q8IWX5 399 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 LNX2Q8N448 690 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 OR1M1Q8NGA1 313 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 OR13D1Q8NGV5 346 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 MZB1Q8WU39 189 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 ZNF426Q9BUY5 554 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 HDHD2Q9H0R4 259 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 AKTIPQ9H8T0 292 aa9.25□□□□□ -0.93
USP11-208ENST00000480104 A0A1W2PPH5 198 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 A0A1W2PPM1 405 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 GGT3PA6NGU5 568 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 CCRL2O00421 344 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 BHLHE40O14503 412 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 BRI3O95415 125 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 LCATP04180 440 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 TSPAN19P0C672 248 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 IL12AP29459 219 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 GABRA2P47869 451 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 SLC35B1P78383 322 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 LRRC74AQ0VAA2 488 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 ZNF273Q14593 569 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 KRTAP27-1Q3LI81 207 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 SLC2A7Q6PXP3 512 aa9.24□□□□□ -0.93
USP11-208ENST00000480104 NAA40Q86UY6 237 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms