RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ZNF740Q8NDX6 193 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 NFKBIDQ8NI38 313 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 SMPDL3BQ92485 455 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 FAM3CQ92520 227 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 ACY3Q96HD9 319 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 AQP10Q96PS8 301 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 LPAR4Q99677 370 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 NKX3-1Q99801 234 aaPredicted RBP11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 CHST6Q9GZX3 395 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 NOP16Q9Y3C1 178 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 ETV7Q9Y603 341 aa11.32□□□□□ -0.6
RTFDC1-207ENST00000477573 PRR19A6NJB7 356 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 K7ERU9 68 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 EIF1AYO14602 144 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 GPANK1O95872 356 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 MMP7P09237 267 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 CALCBP10092 127 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 ST6GAL1P15907 406 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 RAB6AP20340 208 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 EPHA8P29322 1005 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 ALDH3B1P43353 468 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 EIF1AXP47813 144 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 CLDN18P56856 261 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TAS2R20P59543 309 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 PRDX1Q06830 199 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 DHRS2Q13268 280 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 SCGB2A2Q13296 93 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 DUSP5Q16690 384 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 SOHLH1Q5JUK2 328 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 UNQ9370/PRO34162Q6UXP9 181 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TMEM92Q6UXU6 159 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TMED4Q7Z7H5 227 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 OR4C5Q8NGB2 326 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 OR4K1Q8NGD4 311 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TOMM40LQ969M1 308 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TMEM106AQ96A25 262 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 ZBTB8AQ96BR9 441 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 ZNF48Q96MX3 618 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 NDC1Q9BTX1 674 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 EIF5A2Q9GZV4 153 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TAF9BQ9HBM6 251 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 FGF22Q9HCT0 170 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 PLSCR4Q9NRQ2 329 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 CSAG2Q9Y5P2 127 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 A0A1W2PPV9 198 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 J3KRW8 73 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 SAP18O00422 153 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TNFRSF10CO14798 259 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 LATO43561 262 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 WDR1O75083 606 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TNFSF13O75888 250 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TBX6O95947 436 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 KLK1P06870 262 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 LYL1P12980 280 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 MAKP20794 623 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 GLIPR1P48060 266 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 YPEL5P62699 121 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 MORN2Q502X0 79 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 FDX2Q6P4F2 183 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 ZNF836Q6ZNA1 936 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 ZNF775Q96BV0 537 aaPredicted RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 CTHRC1Q96CG8 243 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 PGLYRP3Q96LB9 341 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 PRAP1Q96NZ9 151 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 G6PC3Q9BUM1 346 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 NMES1Q9C002 83 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 MAGT1Q9H0U3 335 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 CXorf36Q9H7Y0 433 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 CDH20Q9HBT6 801 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 RYDENQ9NUL5 291 aaKnown RBP11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
RTFDC1-207ENST00000477573 LOC100509620A0A075B734 347 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 GLSO94925 669 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 OR2T7P0C7T2 308 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 MMP11P24347 488 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 PPICP45877 212 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 PRKAG1P54619 331 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 CLDN2P57739 230 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 TAS2R50P59544 299 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 ARL6IP1Q15041 203 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 TMEM108Q6UXF1 575 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 MAML2Q8IZL2 1156 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 LINC01555Q8NAE3 123 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 LFNGQ8NES3 379 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 NOXO1Q8NFA2 376 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 DNASE2BQ8WZ79 361 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 MIB2Q96AX9 1013 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 FAM46AQ96IP4 442 aaKnown RBP11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 PHF7Q9BWX1 381 aaPredicted RBP11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 MS4A8Q9BY19 250 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 FKBP11Q9NYL4 201 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 IKZF2Q9UKS7 526 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 GPR52Q9Y2T5 361 aa11.3□□□□□ -0.6
RTFDC1-207ENST00000477573 SERPINE3A8MV23 424 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms