RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ZNF879B4DU55 563 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 HLA-DPB1P04440 258 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 TGFBR1P36897 503 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 Q499Y3 187 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 ZMAT1Q5H9K5 638 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 SLC16A12Q6ZSM3 486 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 OR5AS1Q8N127 324 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 BHLHE23Q8NDY6 225 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 OR56B2PQ8NGI1 322 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 HAVCR1Q96D42 359 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 ZNF275Q9NSD4 429 aaPredicted RBP16.46■□□□□ 0.23
PSPC1-203ENST00000471658 DUSP13Q9UII6 198 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 ZNF391Q9UJN7 358 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 CEPT1Q9Y6K0 416 aa16.46■□□□□ 0.23
PSPC1-203ENST00000471658 HELZ2Q9BYK8 2649 aaKnown RBP16.46■□□□□ 0.23
PSPC1-203ENST00000471658 TRDV1A0A1B0GX56 115 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 CD300LBA8K4G0 201 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 FAHP16930 419 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 OR8B8Q15620 311 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 TRAM1Q15629 374 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 DMRTC1Q5HYR2 192 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 C22orf42Q6IC83 251 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 ANKRD13BQ86YJ7 626 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 SEMA6DQ8NFY4 1073 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 DERL3Q96Q80 235 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 SYT3Q9BQG1 590 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 CENPOQ9BU64 300 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 NOX4Q9NPH5 578 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 MYEF2Q9P2K5 600 aaKnown RBP16.45■□□□□ 0.22
PSPC1-203ENST00000471658 PIGLQ9Y2B2 252 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 TRBV5-7A0A0A0MS05 114 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 LOC390937A0A1W2PQ73 354 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 A6NNC1 897 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 AIREO43918 545 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 RAC2P15153 192 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 CFL1P23528 166 aaKnown RBP16.45■□□□□ 0.22
PSPC1-203ENST00000471658 GCH1P30793 250 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 TTKP33981 857 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 MAP2K3P46734 347 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 MBNL2Q5VZF2 373 aaKnown RBP16.45■□□□□ 0.22
PSPC1-203ENST00000471658 ASPHD2Q6ICH7 369 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 SYNPRQ8TBG9 265 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 TMEM106AQ96A25 262 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 MRPL37Q9BZE1 423 aaKnown RBP16.45■□□□□ 0.22
PSPC1-203ENST00000471658 TXNL4BQ9NX01 149 aaKnown RBP16.45■□□□□ 0.22
PSPC1-203ENST00000471658 ENPP5Q9UJA9 477 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 SSR3Q9UNL2 185 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 RHBDD3Q9Y3P4 386 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 CMAHPQ9Y471 501 aa16.45■□□□□ 0.22
PSPC1-203ENST00000471658 MTRF1O75570 445 aaKnown RBP16.44■□□□□ 0.22
PSPC1-203ENST00000471658 SERPINA3P01011 423 aa16.44■□□□□ 0.22
PSPC1-203ENST00000471658 ZNF250P15622 560 aa16.44■□□□□ 0.22
PSPC1-203ENST00000471658 TUBG1P23258 451 aa16.44■□□□□ 0.22
PSPC1-203ENST00000471658 RIPPLY1Q0D2K3 151 aa16.44■□□□□ 0.22
PSPC1-203ENST00000471658 ADIPOQQ15848 244 aa16.44■□□□□ 0.22
PSPC1-203ENST00000471658 C1orf174Q8IYL3 243 aa16.44■□□□□ 0.22
PSPC1-203ENST00000471658 TUBG2Q9NRH3 451 aa16.44■□□□□ 0.22
PSPC1-203ENST00000471658 CISD1Q9NZ45 108 aaKnown RBP16.44■□□□□ 0.22
PSPC1-203ENST00000471658 KCNN3Q9UGI6 736 aa16.44■□□□□ 0.22
PSPC1-203ENST00000471658 PURGQ9UJV8 347 aaKnown RBP16.44■□□□□ 0.22
PSPC1-203ENST00000471658 OR4A8P0C604 315 aa16.43■□□□□ 0.22
PSPC1-203ENST00000471658 RPS23P62266 143 aaKnown RBP16.43■□□□□ 0.22
PSPC1-203ENST00000471658 ZNF672Q499Z4 452 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-203ENST00000471658 RBM38Q9H0Z9 239 aaKnown RBP16.43■□□□□ 0.22
PSPC1-203ENST00000471658 OPA3Q9H6K4 179 aa16.43■□□□□ 0.22
PSPC1-203ENST00000471658 ZNF442Q9H7R0 627 aa16.43■□□□□ 0.22
PSPC1-203ENST00000471658 ROS1P08922 2347 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 SHISA3A0PJX4 238 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 GATBO75879 557 aaKnown RBP16.42■□□□□ 0.22
PSPC1-203ENST00000471658 GABARAPO95166 117 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 UCHL1P09936 223 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 ZNF20P17024 532 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 GNALP38405 381 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 VBP1P61758 197 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 CTF1Q16619 201 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 FOXB2Q5VYV0 432 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 GTF3AQ92664 365 aaKnown RBP16.42■□□□□ 0.22
PSPC1-203ENST00000471658 MRPL24Q96A35 216 aaKnown RBP16.42■□□□□ 0.22
PSPC1-203ENST00000471658 PSMG3-AS1Q96PY0 264 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 PLEKHA1Q9HB21 404 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 TAS2R4Q9NYW5 299 aa16.42■□□□□ 0.22
PSPC1-203ENST00000471658 TRAV8-7A0A075B6U6 113 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 IQCF6A8MYZ5 107 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 TIMM8AO60220 97 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-203ENST00000471658 COX6B1P14854 86 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 ZNF12P17014 697 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 KITLGP21583 273 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 CALRP27797 417 aaKnown RBP16.41■□□□□ 0.22
PSPC1-203ENST00000471658 FGF9P31371 208 aaPredicted RBP16.41■□□□□ 0.22
PSPC1-203ENST00000471658 NCS1P62166 190 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 PARP16Q8N5Y8 322 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 CCDC54Q8NEL0 328 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 PIGCQ92535 297 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 GPR173Q9NS66 373 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 IGLV3-9A0A075B6K5 115 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 CCDC160A6NGH7 325 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 A6NHS1 94 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 IGHV3-13P01766 116 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 CD2P06729 351 aa16.41■□□□□ 0.22
PSPC1-203ENST00000471658 GALP22466 123 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms