RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 OR8G1Q15617 311 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 GFOD2Q3B7J2 385 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 KCTD20Q7Z5Y7 419 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 EGFL6Q8IUX8 553 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 FTMTQ8N4E7 242 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 ACBD7Q8N6N7 88 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 YIPF7Q8N8F6 280 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 APH1BQ8WW43 257 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 HPS1Q92902 700 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 RAB1CQ92928 201 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 ERGIC1Q969X5 290 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 LGALS12Q96DT0 336 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 SIGLEC11Q96RL6 698 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 ADI1Q9BV57 179 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 TMEM106BQ9NUM4 274 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 PPP1R3CQ9UQK1 317 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 SNX5Q9Y5X3 404 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 CACNG2Q9Y698 323 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 MTORP42345 2549 aa12.93□□□□□ -0.34
SDC3-203ENST00000471567 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.92□□□□□ -0.34
SDC3-203ENST00000471567 DAPL1A0PJW8 107 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 H0YJX3 145 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 WBP4O75554 376 aaKnown RBP12.92□□□□□ -0.34
SDC3-203ENST00000471567 FADS2O95864 444 aaKnown RBP12.92□□□□□ -0.34
SDC3-203ENST00000471567 IGLV3-1P01715 115 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 CAPGP40121 348 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 GATA4P43694 442 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 GZMKP49863 264 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 KRTAP1-1Q07627 177 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 MFGE8Q08431 387 aaPredicted RBP12.92□□□□□ -0.34
SDC3-203ENST00000471567 MAB21L1Q13394 359 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 ZNF181Q2M3W8 571 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 LIPNQ5VXI9 398 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 KRT74Q7RTS7 529 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 PEG10Q86TG7 708 aaKnown RBP12.92□□□□□ -0.34
SDC3-203ENST00000471567 ELMOD2Q8IZ81 293 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 PLPP7Q8NBV4 271 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 MRPL48Q96GC5 212 aaKnown RBP12.92□□□□□ -0.34
SDC3-203ENST00000471567 LYZL4Q96KX0 146 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 ADAT1Q9BUB4 502 aaKnown RBP12.92□□□□□ -0.34
SDC3-203ENST00000471567 GCM1Q9NP62 436 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 G6PC2Q9NQR9 355 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 OR52A1Q9UKL2 312 aa12.92□□□□□ -0.34
SDC3-203ENST00000471567 CD5LO43866 347 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 PTBP3O95758 552 aaKnown RBP12.91□□□□□ -0.34
SDC3-203ENST00000471567 CLIC3O95833 236 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 TTRP02766 147 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 MAP2K3P46734 347 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 ISL1P61371 349 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 CDONQ4KMG0 1287 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 BCL2L15Q5TBC7 163 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 CYB5R2Q6BCY4 276 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 FAM220AQ7Z4H9 259 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 AMBNQ9NP70 447 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 ABCB9Q9NP78 766 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 INPP5EQ9NRR6 644 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 TREM2Q9NZC2 230 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 WIPI2Q9Y4P8 454 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 MPC1Q9Y5U8 109 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 NPTNQ9Y639 398 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 ABCA1O95477 2261 aa12.91□□□□□ -0.34
SDC3-203ENST00000471567 LRP5LA4QPB2 252 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 LRRC30A6NM36 301 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 MTRF1O75570 445 aaKnown RBP12.9□□□□□ -0.34
SDC3-203ENST00000471567 RPP14O95059 124 aaKnown RBP12.9□□□□□ -0.34
SDC3-203ENST00000471567 CST4P01036 141 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 IGHA1P01876 353 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 IGHV4-31P0DP07 118 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 ACKR3P25106 362 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 GNALP38405 381 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 ACTA2P62736 377 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 ACTG2P63267 376 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 MVKQ03426 396 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 RIPK1Q13546 671 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 GALEQ14376 348 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 ZBTB37Q5TC79 503 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 CATSPERDQ86XM0 798 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 C8orf59Q8N0T1 100 aaPredicted RBP12.9□□□□□ -0.34
SDC3-203ENST00000471567 CLDND2Q8NHS1 167 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 OR51E1Q8TCB6 317 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 Q8TCH9 128 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 NRG4Q8WWG1 115 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 RORBQ92753 470 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 TFAP2CQ92754 450 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 PPP1R14AQ96A00 147 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 C1orf159Q96HA4 380 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 GPR84Q9NQS5 396 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 C14orf119Q9NWQ9 140 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 GNG8Q9UK08 70 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 GTF2A1LQ9UNN4 478 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 RHBDD3Q9Y3P4 386 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 TANC2Q9HCD6 1990 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 DYSFO75923 2080 aa12.9□□□□□ -0.34
SDC3-203ENST00000471567 YLPM1P49750 1951 aaKnown RBP12.89□□□□□ -0.35
SDC3-203ENST00000471567 IRGMA1A4Y4 181 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 TMEM178BH3BS89 294 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 FAM20BO75063 409 aa12.89□□□□□ -0.35
SDC3-203ENST00000471567 FSTL3O95633 263 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms