RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 EDAQ92838 391 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 GNRHR2Q96P88 292 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 DOK5Q9P104 306 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 CGGBP1Q9UFW8 167 aaPredicted RBP11.03□□□□□ -0.64
USP11-206ENST00000469080 FARSAQ9Y285 508 aaKnown RBP11.03□□□□□ -0.64
USP11-206ENST00000469080 A0A087WUJ7 227 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 CIDEAO60543 219 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 ZNF354AO60765 605 aaPredicted RBP11.03□□□□□ -0.64
USP11-206ENST00000469080 OR2A4O95047 310 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 CD14P08571 375 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 CDAP32320 146 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 TPBGQ13641 420 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 MEF2DQ14814 521 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 BATFQ16520 125 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 C1orf185Q5T7R7 199 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 POGLUT1Q8NBL1 392 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 OR2A7Q96R45 310 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 CMKLR1Q99788 373 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 NRIP2Q9BQI9 281 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 WWTR1Q9GZV5 400 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 HRASLSQ9HDD0 168 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 KLHDC2Q9Y2U9 406 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 SF3B6Q9Y3B4 125 aaKnown RBP11.03□□□□□ -0.64
USP11-206ENST00000469080 MED13LQ71F56 2210 aa11.03□□□□□ -0.64
USP11-206ENST00000469080 MGAQ8IWI9 3026 aa11.02□□□□□ -0.64
USP11-206ENST00000469080 PRR19A6NJB7 356 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 CCNOP22674 350 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 GUCA1AP43080 201 aaPredicted RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 PPICP45877 212 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 PITPNAQ00169 270 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 EGR3Q06889 387 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 GFI1BQ5VTD9 330 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 BPIFB2Q8N4F0 458 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 OR5D18Q8NGL1 313 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 OR5AK2Q8NH90 309 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 DVL3Q92997 716 aaPredicted RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 SLC46A1Q96NT5 459 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 AMELYQ99218 206 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 SNHG12Q9BXW3 62 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 OR14J1Q9UGF5 321 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 SPTBN1Q01082 2364 aaKnown RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 TGOLN2O43493 480 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 FGF9P31371 208 aaPredicted RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 DNASE1L1P49184 302 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 LTBQ06643 244 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 EIF2B1Q14232 305 aaKnown RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 EBPQ15125 230 aaKnown RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 ARSJQ5FYB0 599 aaPredicted RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 LCN10Q6JVE6 187 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 R3HDM4Q96D70 268 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 AKR1E2Q96JD6 320 aa11.02□□□□□ -0.65
USP11-206ENST00000469080 FGF20Q9NP95 211 aaPredicted RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 ZNF223Q9UK11 482 aaPredicted RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 NUP210Q8TEM1 1887 aaPredicted RBP11.02□□□□□ -0.65
USP11-206ENST00000469080 TMEM210A6NLX4 147 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 M0R143 59 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 CD80P33681 288 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 SERPINF1P36955 418 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 CD96P40200 585 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 ZNF41P51814 821 aaPredicted RBP11.01□□□□□ -0.65
USP11-206ENST00000469080 ZNF674Q2M3X9 581 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 HACD4Q5VWC8 232 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 HBMQ6B0K9 141 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 TMED4Q7Z7H5 227 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 NR2C2APQ86WQ0 139 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 OR51D1Q8NGF3 324 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 CTHRC1Q96CG8 243 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 IP6K3Q96PC2 410 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 S100A13Q99584 98 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 COMMD4Q9H0A8 199 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 STARD10Q9Y365 291 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 TECTAO75443 2155 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 MUC6Q6W4X9 2439 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 A8MXE2 369 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 ZFPL1O95159 310 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 CALCBP10092 127 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 ATF1P18846 271 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 EFNA3P52797 238 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 MRPS11P82912 194 aaKnown RBP11.01□□□□□ -0.65
USP11-206ENST00000469080 LINC00303Q3SY05 128 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 TMPRSS11FQ6ZWK6 438 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 HIST2H3AQ71DI3 136 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 BEST3Q8N1M1 668 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 ZNF615Q8N8J6 731 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 IFI44Q8TCB0 444 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 ZNF385AQ96PM9 386 aaKnown RBP11.01□□□□□ -0.65
USP11-206ENST00000469080 MYOZ1Q9NP98 299 aaPredicted RBP11.01□□□□□ -0.65
USP11-206ENST00000469080 COMMD9Q9P000 198 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 EMC9Q9Y3B6 208 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 MED13Q9UHV7 2174 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 A0A0D9SG52 128 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 A0A1W2PQM1 296 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 RPA2P15927 270 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.01□□□□□ -0.65
USP11-206ENST00000469080 PXKQ7Z7A4 578 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 GLB1L2Q8IW92 636 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 OR6N1Q8NGY5 312 aa11.01□□□□□ -0.65
USP11-206ENST00000469080 FAM71F1Q96KD3 344 aaPredicted RBP11.01□□□□□ -0.65
USP11-206ENST00000469080 GPER1Q99527 375 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms