RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, human

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS6-205	ENST00000465027	PPIAL4G	P0DN37	164 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	SLC2A5	P22732	501 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	HTR1F	P30939	366 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	GDI2	P50395	445 aa	Known RBP	13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	ZNF84	P51523	738 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	PSG4	Q00888	419 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	PSG7	Q13046	419 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	HLX	Q14774	488 aa	Predicted RBP	13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	HIST3H3	Q16695	136 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	BEAN1	Q3B7T3	259 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	KCTD21	Q4G0X4	260 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	SLC35D3	Q5M8T2	416 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	BTNL3	Q6UXE8	466 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	LRRN1	Q6UXK5	716 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	CYB561A3	Q8NBI2	242 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	NOXO1	Q8NFA2	376 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	OR2Z1	Q8NG97	314 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	LINC01006	Q8NI28	216 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	NMD3	Q96D46	503 aa	Known RBP	13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	TCF7L1	Q9HCS4	588 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	CCNB1IP1	Q9NPC3	277 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	AASS	Q9UDR5	926 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	MYRF	Q9Y2G1	1151 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	UGT2A1	Q9Y4X1	527 aa		13.73	□□□□□ -0.21
COPS6-205	ENST00000465027	FAM183A	A6NL82	134 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027		H0YL77	283 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	RPS2	P15880	293 aa	Known RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	CRHBP	P24387	322 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	CRABP1	P29762	137 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	FMO3	P31513	532 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	MDH2	P40926	338 aa	Known RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	CENPA	P49450	140 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	ZNF133	P52736	654 aa	Predicted RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	PROK1	P58294	105 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	GABARAPL2	P60520	117 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	FGF12	P61328	243 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	FMOD	Q06828	376 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	SGCA	Q16586	387 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	MEPCE	Q7L2J0	689 aa	Known RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	ZBTB46	Q86UZ6	589 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	OR2T4	Q8NH00	348 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	RAB40A	Q8WXH6	277 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	NABP1	Q96AH0	204 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	HCAR1	Q9BXC0	346 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	WNT5B	Q9H1J7	359 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	SYT4	Q9H2B2	425 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	MRPS18A	Q9NVS2	196 aa	Known RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	SCN3B	Q9NY72	215 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	HAO2	Q9NYQ3	351 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	CNOT2	Q9NZN8	540 aa	Known RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	ASH2L	Q9UBL3	628 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	WARS2	Q9UGM6	360 aa	Known RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	PPP1R3C	Q9UQK1	317 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	TPRKB	Q9Y3C4	175 aa		13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	RPL36	Q9Y3U8	105 aa	Known RBP	13.72	□□□□□ -0.21
COPS6-205	ENST00000465027	IGHV3-64D	A0A0J9YX35	117 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	CCDC182	A6NF36	153 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	TMEM178B	H3BS89	294 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	PIP	P12273	146 aa	Predicted RBP	13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	SPI1	P17947	270 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	LIPA	P38571	399 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	SLC15A1	P46059	708 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	MMP16	P51512	607 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	GNB2	P62879	340 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	ZNF91	Q05481	1191 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	SMN1	Q16637	294 aa	Known RBP	13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	LCN1P1	Q5VSP4	162 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	DNM1P34	Q6PK57	102 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	KLB	Q86Z14	1044 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	BBS1	Q8NFJ9	593 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	BPIFB6	Q8NFQ5	453 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	NSMAF	Q92636	917 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	RBP7	Q96R05	134 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	CDADC1	Q9BWV3	514 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	MED20	Q9H944	212 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	SIAE	Q9HAT2	523 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	RPRD1B	Q9NQG5	326 aa	Known RBP	13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	FKBP14	Q9NWM8	211 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	PSORS1C1	Q9UIG5	152 aa		13.71	□□□□□ -0.21
COPS6-205	ENST00000465027	IGLV1-36	A0A0B4J1U3	117 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	IRGM	A1A4Y4	181 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	EFCAB10	A6NFE3	127 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027		H7C1C5	153 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	PIN1P1	O15428	100 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	MRPS14	O60783	128 aa	Known RBP	13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	FAM20B	O75063	409 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	CLPX	O76031	633 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	GLCE	O94923	617 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	CYB5R3	P00387	301 aa	Predicted RBP	13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	DBT	P11182	482 aa	Known RBP	13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	BLVRA	P53004	296 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	LCN6	P62502	163 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	POU4F2	Q12837	409 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	APOF	Q13790	326 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	NRN1L	Q496H8	165 aa		13.7	□□□□□ -0.22
COPS6-205	ENST00000465027	ZMAT1	Q5H9K5	638 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms