RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SLC30A8Q8IWU4 369 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 LRRC25Q8N386 305 aaPredicted RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 SPEM1Q8N4L4 309 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ACOT4Q8N9L9 421 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 OR4F6Q8NGB9 312 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 SYNPRQ8TBG9 265 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 LRRC15Q8TF66 581 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 Q8WTZ3 238 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ORAOV1Q8WV07 137 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 EEF1AKMT1Q8WVE0 214 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 HPSE2Q8WWQ2 592 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 MRPS31Q92665 395 aaKnown RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 RBPMSQ93062 196 aaKnown RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 TOMM40LQ969M1 308 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 IMP4Q96G21 291 aaKnown RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 COL21A1Q96P44 957 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 GPR78Q96P69 363 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TSSK2Q96PF2 358 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 UHRF2Q96PU4 802 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 NODALQ96S42 347 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 GPR22Q99680 433 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 SIGMAR1Q99720 223 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ATF6BQ99941 703 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 TM6SF1Q9BZW5 370 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ACTR3CQ9C0K3 210 aaPredicted RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 CHRNA10Q9GZZ6 450 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 RHOJQ9H4E5 214 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 GSTO2Q9H4Y5 243 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 CACYBPQ9HB71 228 aaKnown RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 PATZ1Q9HBE1 687 aaKnown RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 LRTM1Q9HBL6 345 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 NMRAL1Q9HBL8 299 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 POLD4Q9HCU8 107 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 C14orf105Q9NVL8 296 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 OR1A1Q9P1Q5 309 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 VPS29Q9UBQ0 182 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 B4GALT7Q9UBV7 327 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 STEAP1Q9UHE8 339 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ZNF230Q9UIE0 474 aaPredicted RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 ZNF107Q9UII5 783 aaPredicted RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 FBXO4Q9UKT5 387 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 SNX12Q9UMY4 172 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 MRPS17Q9Y2R5 130 aaKnown RBP4.71□□□□□ -1.66
VPS41-209ENST00000457055 RIC1Q4ADV7 1423 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 OTOFQ9HC10 1997 aa4.71□□□□□ -1.66
VPS41-209ENST00000457055 ANKRD36CQ5JPF3 1778 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ZDBF2Q9HCK1 2354 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 MYH15Q9Y2K3 1946 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 COL3A1P02461 1466 aaPredicted RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 CENPVL3A0A0U1RRI6 287 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 A0A1W2PPV9 198 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 LRP5LA4QPB2 252 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 H3BTX0 84 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 OR7A17O14581 309 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ARPC1BO15143 372 aaKnown RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 ORC5O43913 435 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 RFPL2O75678 378 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CNMDO75829 334 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ATG12O94817 140 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 LRATO95237 230 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 GADD45GO95257 159 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 SLC25A27O95847 323 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 IGHG3P01860 377 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 OR56A5P0C7T3 313 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 EPCAMP16422 314 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 HTR1EP28566 365 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 GCAP28676 217 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ADORA2BP29275 332 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CASP1P29466 404 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 SPRP35270 261 aaPredicted RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 HPCAL1P37235 193 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 PIGAP37287 484 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 TNFSF9P41273 254 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 STC1P52823 247 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 PAX9P55771 341 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CLDN20P56880 219 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CLDN2P57739 230 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 SLC35B1P78383 322 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 PSG6Q00889 435 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 BAXQ07812 192 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 C1orf61Q13536 156 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CDH18Q13634 790 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 EDDM3AQ14507 147 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ZNF234Q14588 700 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ZNF235Q14590 738 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 MELKQ14680 651 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 NEDD8Q15843 81 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 TAL2Q16559 108 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 UPP1Q16831 310 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 TCTN1Q2MV58 587 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 TRMT5Q32P41 509 aaKnown RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 OCIAD2Q56VL3 154 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 VWA2Q5GFL6 755 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 OTUD1Q5VV17 481 aaPredicted RBP4.7□□□□□ -1.66
VPS41-209ENST00000457055 KIAA0895LQ68EN5 471 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ANKRD16Q6P6B7 361 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 CASP12Q6UXS9 341 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 UNQ6126/PRO20091Q6UXV3 157 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 RAD9BQ6WBX8 426 aa4.7□□□□□ -1.66
VPS41-209ENST00000457055 ZNF782Q6ZMW2 699 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms