RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 HACD2Q6Y1H2 254 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 REC114Q7Z4M0 266 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 VMO1Q7Z5L0 202 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 FTMTQ8N4E7 242 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 C19orf18Q8NEA5 215 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 OR2T4Q8NH00 348 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 OR4K13Q8NH42 304 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 ST8SIA4Q92187 359 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 DHRS1Q96LJ7 313 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 TSSK2Q96PF2 358 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 NSRP1Q9H0G5 558 aaKnown RBP6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 OR52D1Q9H346 318 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 SMURF1Q9HCE7 757 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 PNRC2Q9NPJ4 139 aaKnown RBP6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 FGFR1OP2Q9NVK5 253 aa6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 ARGLU1Q9NWB6 273 aaPredicted RBP6.62□□□□□ -1.35
NIF3L1-209ENST00000454952 TRBV4-1A0A0J9YWV2 114 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 ANKRD61A6NGH8 418 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 NKX6-3A6NJ46 265 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 NME4O00746 187 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 NDUFB3O43676 98 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 OR10H3O60404 316 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 FBXO24O75426 580 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 GADD45GO95257 159 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 LHBP01229 141 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 APOC1P02654 83 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 GRPP07492 148 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 HIST1H1CP16403 213 aaKnown RBP6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 OTX1P32242 354 aaPredicted RBP6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 SLC15A1P46059 708 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 GSK3BP49841 420 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 BLVRAP53004 296 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 FXYD6P3P58550 94 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 ZNF92Q03936 586 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 BLMHQ13867 455 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 FBLN7Q53RD9 439 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 LRRC10Q5BKY1 277 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 C1orf122Q6ZSJ8 110 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 Q6ZSV7 163 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 Q6ZTK2 550 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 FAM90A1Q86YD7 464 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 GCSAMQ8N6F7 178 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 LY6G5BQ8NDX9 201 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 PROKR2Q8NFJ6 384 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 OR52L1Q8NGH7 329 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 MCUR1Q96AQ8 359 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 COPS4Q9BT78 406 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 FAM234AQ9H0X4 552 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 DNTTIP1Q9H147 329 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 RAB18Q9NP72 206 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 ABCB9Q9NP78 766 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 DCAF13Q9NV06 445 aaKnown RBP6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 ZNRD1Q9P1U0 126 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 ONECUT1Q9UBC0 465 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 CD300AQ9UGN4 299 aa6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 PRPF19Q9UMS4 504 aaKnown RBP6.61□□□□□ -1.35
NIF3L1-209ENST00000454952 ZNF816-ZNF321PA0A0X1KG74 233 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 OR6C68A6NDL8 312 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 ZNF878C9JN71 531 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 RNASEK-C17orf49H0YIS7 233 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 NPFFO15130 113 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 PLXNB1O43157 2135 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 TSPAN15O95858 294 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 COX4I1P13073 169 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 GABRA5P31644 462 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 GNALP38405 381 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 NUDT2P50583 147 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 KRTAP10-3P60369 221 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 GRB2P62993 217 aaKnown RBP6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 IL5RAQ01344 420 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 SPIBQ01892 262 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 EGR3Q06889 387 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 ACSM1Q08AH1 577 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 HERPUD1Q15011 391 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 SEC23BQ15437 767 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 SNAI3Q3KNW1 292 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 GLYATL3Q5SZD4 288 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 PGBD2Q6P3X8 592 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 DPY19L4Q7Z388 723 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 CPLX4Q7Z7G2 160 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 NAA40Q86UY6 237 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 ZDHHC21Q8IVQ6 265 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 LINC00471Q8N535 108 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 FAM86B1Q8N7N1 296 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 CYB561A3Q8NBI2 242 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 CSNK2A3Q8NEV1 391 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 SDR9C7Q8NEX9 313 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 OR56B2PQ8NGI1 322 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 OR52H1Q8NGJ2 320 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 OR4C13Q8NGP0 309 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 OR52J3Q8NH60 311 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 C8orf46Q8TAG6 207 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 FAM110DQ8TAY7 271 aaPredicted RBP6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 GNPDA2Q8TDQ7 276 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 LRRC29Q8WV35 223 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 SPSB4Q96A44 273 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 CMTM5Q96DZ9 223 aa6.6□□□□□ -1.35
NIF3L1-209ENST00000454952 MED30Q96HR3 178 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms