RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 METTL15A6NJ78 407 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 LOC110117498-PIK3R3F6TDL0 507 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 APOL3O95236 402 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 PTBP3O95758 552 aaKnown RBP12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 IGLV3-1P01715 115 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 HLA-DPB1P04440 258 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 DBTP11182 482 aaKnown RBP12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 CA6P23280 308 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 ZNF91Q05481 1191 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 RAB40BQ12829 278 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 KRT74Q7RTS7 529 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 KCTD20Q7Z5Y7 419 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 ACBD7Q8N6N7 88 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 YIPF7Q8N8F6 280 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 APH1BQ8WW43 257 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 CYGBQ8WWM9 190 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 MRPL48Q96GC5 212 aaKnown RBP12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 TBX5Q99593 518 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 GCM1Q9NP62 436 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 ABCB9Q9NP78 766 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 TMEM106BQ9NUM4 274 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 NKX1-2Q9UD57 310 aaPredicted RBP12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 CACNG2Q9Y698 323 aa12.71□□□□□ -0.37
CSNK1E-210ENST00000442216 CSPG4Q6UVK1 2322 aa12.71□□□□□ -0.38
CSNK1E-210ENST00000442216 DAPL1A0PJW8 107 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 F5H5P2 479 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 H0YHG0 523 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 H0YJX3 145 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 FADS2O95864 444 aaKnown RBP12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 PNPP00491 289 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 MAP2K3P46734 347 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 ISL1P61371 349 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 IL5RAQ01344 420 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 ZNF85Q03923 595 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 MAB21L1Q13394 359 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 GFOD2Q3B7J2 385 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 CDONQ4KMG0 1287 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 KLHL22Q53GT1 634 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 LIPNQ5VXI9 398 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 CYB5R2Q6BCY4 276 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 ELMOD2Q8IZ81 293 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 Q8TCH9 128 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 LGALS12Q96DT0 336 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 C1orf159Q96HA4 380 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 LYZL4Q96KX0 146 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 SIGLEC11Q96RL6 698 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 ADAT1Q9BUB4 502 aaKnown RBP12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 ADI1Q9BV57 179 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 G6PC2Q9NQR9 355 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 INPP5EQ9NRR6 644 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 C14orf119Q9NWQ9 140 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 AASSQ9UDR5 926 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 OR52A1Q9UKL2 312 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 WIPI2Q9Y4P8 454 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 MPC1Q9Y5U8 109 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 NPTNQ9Y639 398 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 MALRD1Q5VYJ5 2156 aa12.7□□□□□ -0.38
CSNK1E-210ENST00000442216 MAGEB4O15481 346 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 WBP4O75554 376 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 MTRF1O75570 445 aaKnown RBP12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 FSTL3O95633 263 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 CST4P01036 141 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 IGHA1P01876 353 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 TTRP02766 147 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 IGHV4-31P0DP07 118 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 CAPGP40121 348 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 ACTA2P62736 377 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 ACTG2P63267 376 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 MFGE8Q08431 387 aaPredicted RBP12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 ZBTB37Q5TC79 503 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 Q6ZSR3 168 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 FAM220AQ7Z4H9 259 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 C1orf87Q8N0U7 546 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 CLDND2Q8NHS1 167 aa12.69□□□□□ -0.38
CSNK1E-210ENST00000442216 IRGMA1A4Y4 181 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 LRP5LA4QPB2 252 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 LRRC30A6NM36 301 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 DHRS7CA6NNS2 312 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 TMEM178BH3BS89 294 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 IGHV2-70P01814 119 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 ACKR3P25106 362 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 GNALP38405 381 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 MVKQ03426 396 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 BCL2L15Q5TBC7 163 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 CATSPERDQ86XM0 798 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 CCDC54Q8NEL0 328 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 OR8S1Q8NH09 359 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 RORBQ92753 470 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 JAM3Q9BX67 310 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 VCX3BQ9H321 246 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 FN3KRPQ9HA64 309 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 GPR84Q9NQS5 396 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 TREM2Q9NZC2 230 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 ABCA2Q9BZC7 2435 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 DOCK11Q5JSL3 2073 aa12.68□□□□□ -0.38
CSNK1E-210ENST00000442216 ZANQ9Y493 2812 aa12.67□□□□□ -0.38
CSNK1E-210ENST00000442216 ZNF816-ZNF321PA0A0X1KG74 233 aa12.67□□□□□ -0.38
CSNK1E-210ENST00000442216 LOC100289279A0A1B0GTE1 492 aa12.67□□□□□ -0.38
CSNK1E-210ENST00000442216 ANXA2P2A6NMY6 339 aa12.67□□□□□ -0.38
CSNK1E-210ENST00000442216 FAM20BO75063 409 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms