RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 CHRNA9Q9UGM1 479 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 LSM2Q9Y333 95 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 WDR45Q9Y484 360 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 B9A039 149 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 AIPO00170 330 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 LANCL1O43813 399 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 LMX1BO60663 402 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 GADD45GO95257 159 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 RAB3DO95716 219 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 OPN1SWP03999 348 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 RLN2P04090 185 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SHC1P29353 583 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 MPGP29372 298 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 BTCP35070 178 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 IFNGR2P38484 337 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 RPS7P62081 194 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 H3F3AP84243 136 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 RBMS2Q15434 407 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SYPL1Q16563 259 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 PAN3Q58A45 887 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF311Q5JNZ3 666 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SLC22A25Q6T423 547 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 METAP1DQ6UB28 335 aaPredicted RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 RBMS3Q6XE24 437 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 DEF8Q6ZN54 512 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 LHFPL2Q6ZUX7 228 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 GATSQ8NAP1 163 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SYT14Q8NB59 555 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 OR5T1Q8NG75 326 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 OR5D16Q8NGK9 328 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 COQ8AQ8NI60 647 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SFT2D1Q8WV19 159 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 NEU4Q8WWR8 484 aaPredicted RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 OTUB1Q96FW1 271 aaPredicted RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 POLR2J2Q9GZM3 115 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 POLR2J3Q9H1A7 115 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 RLIMQ9NVW2 624 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 PRSS50Q9UI38 385 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 STUB1Q9UNE7 303 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 IGHV4-30-2A0A087WSY4 118 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 A0A0U1RQV5 110 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SERTM2A0A1B0GWG4 89 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 ARRDC5A6NEK1 342 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 TPST2O60704 377 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 LYZL6O75951 148 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 CCNB2O95067 398 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 DBIP07108 87 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 IGHV4-31P0DP07 118 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 TFPIP10646 304 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SRD5A1P18405 259 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 GIFP27352 417 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SDC2P34741 201 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 POLR2HP52434 150 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 ZP1P60852 638 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 OPCMLQ14982 345 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 C22orf42Q6IC83 251 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 PAQR6Q6TCH4 344 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 CBLN3Q6UW01 205 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 FTMTQ8N4E7 242 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 CLDN22Q8N7P3 220 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 OR52P1PQ8NH57 321 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 C2CD4CQ8TF44 421 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 CMSS1Q9BQ75 279 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF251Q9BRH9 671 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 FNDC11Q9BVV2 318 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 OR51J1Q9H342 316 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 RERGLQ9H628 205 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 BIN3Q9NQY0 253 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF275Q9NSD4 429 aaPredicted RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 C19orf12Q9NSK7 152 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 TXNL4BQ9NX01 149 aaKnown RBP5.24□□□□□ -1.57
PTPRR-204ENST00000440835 COMMD3Q9UBI1 195 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 SEC14L4Q9UDX3 406 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 FBXL3Q9UKT7 428 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 POFUT2Q9Y2G5 429 aa5.24□□□□□ -1.57
PTPRR-204ENST00000440835 RTTNQ86VV8 2226 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 MAP1AP78559 2803 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 MEIKINA0A087WXM9 373 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 A0A0U1RQK1 487 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF320A2RRD8 509 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 KDM4BO94953 1096 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 PNPP00491 289 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 IL1AP01583 271 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 IGHV2-70P01814 119 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 H1F0P07305 194 aaKnown RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 GAAP10253 952 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 CXCL2P19875 107 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 PSMA1P25786 263 aaKnown RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 TAGLN2P37802 199 aaKnown RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 CDH12P55289 794 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ERVK-25P63136 954 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 DEFA5Q01523 94 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 IL18Q14116 193 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 FAM74A1Q5RGS3 127 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 LIPKQ5VXJ0 399 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 CD276Q5ZPR3 534 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF57Q68EA5 555 aaPredicted RBP5.23□□□□□ -1.57
PTPRR-204ENST00000440835 TMEM88Q6PEY1 159 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 GDPGP1Q6ZNW5 385 aa5.23□□□□□ -1.57
PTPRR-204ENST00000440835 FAM122BQ7Z309 247 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms