RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 HOXB8P17481 243 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAB3BP20337 219 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAB4AP20338 218 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 F2RP25116 425 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 CD82P27701 267 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DRD3P35462 400 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 CCT6AP40227 531 aaKnown RBP1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 CDKN2BP42772 138 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 CCR6P51684 374 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 HERVK_113P61574 105 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 RPS15AP62244 130 aaKnown RBP1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 MECOMQ03112 1051 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DOC2AQ14183 400 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 RGNQ15493 299 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 CHRFAM7AQ494W8 412 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 NKAIN1Q4KMZ8 207 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 TCEAL5Q5H9L2 206 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 H3F3CQ6NXT2 135 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 Q6P435 159 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 PCP2Q8IVA1 136 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DUSP18Q8NEJ0 188 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR10AD1Q8NGE0 317 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF596Q8TC21 504 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 NAT6Q93015 286 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 HDHD3Q9BSH5 251 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 TPK1Q9H3S4 243 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 CYP3A43Q9HB55 503 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 LHX9Q9NQ69 397 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 MYEF2Q9P2K5 600 aaKnown RBP1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 DUX4Q9UBX2 424 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 ANKRD36CQ5JPF3 1778 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 RFX7Q2KHR2 1363 aa1.98□□□□□ -2.09
HMGB1P27-201ENST00000431429 LRRC37AA6NMS7 1700 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 DDX60LQ5H9U9 1706 aaKnown RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 ACACBO00763 2458 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 RAD50Q92878 1312 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 IGHV5-51A0A0C4DH38 117 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 A0A1W2PRD5 423 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 C5orf67F2Z3F1 127 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 H7C0C1 242 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 SLC9A3R1O14745 358 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 SIVA1O15304 175 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 IGKV5-2P06315 115 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 CALM1P0DP23 149 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 CALM2P0DP24 149 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 CALM3P0DP25 149 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF121P58317 390 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 UBE2MP61081 183 aaKnown RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 QPRTQ15274 297 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 PSMD5Q16401 504 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZSCAN26Q16670 478 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 HADHQ16836 314 aaKnown RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 TRMT5Q32P41 509 aaKnown RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 HES5Q5TA89 166 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 GPR107Q5VW38 600 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 CEMP1Q6PRD7 247 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 FAM92BQ6ZTR7 304 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 LINC00336Q6ZUF6 198 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 MBOAT2Q6ZWT7 520 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 OAFQ86UD1 273 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 ZNF786Q8N393 782 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 TMEM105Q8N8V8 129 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 CCDC54Q8NEL0 328 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR52E2Q8NGJ4 325 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 TMEM230Q96A57 120 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 RPEQ96AT9 228 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 EXOSC8Q96B26 276 aaKnown RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 C9orf72Q96LT7 481 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR2A5Q96R48 311 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 OR2AG1Q9H205 316 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 BLZF1Q9H2G9 400 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 FANCEQ9HB96 536 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 NOX3Q9HBY0 568 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 AGPAT4Q9NRZ5 378 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 SAMSN1Q9NSI8 373 aaKnown RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 MRPL22Q9NWU5 206 aaKnown RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 CFAP47Q6ZTR5 3102 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 ROBO3Q96MS0 1386 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 CHD6Q8TD26 2715 aa1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 KMT2BQ9UMN6 2715 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P27-201ENST00000431429 NUP98P52948 1817 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 KIF20BQ96Q89 1820 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 ASTN1O14525 1302 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 ADGRA3Q8IWK6 1321 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 SCN9AQ15858 1988 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 UNC79Q9P2D8 2635 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 DCHS1Q96JQ0 3298 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 LAMB1P07942 1786 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 TSPAN11A1L157 253 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 INS-IGF2F8WCM5 200 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 CA11O75493 328 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 CNMDO75829 334 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 SCELO95171 688 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 LSM8O95777 96 aaKnown RBP1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 OTCP00480 354 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 CTSLP07711 333 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 POLR2MP0CAP2 368 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 PRKACAP17612 351 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 MSR1P21757 451 aa1.96□□□□□ -2.1
HMGB1P27-201ENST00000431429 U2AF2P26368 475 aaKnown RBP eCLIP1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms