RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 FAM162AQ96A26 154 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 C7orf34Q96L11 122 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 ANKRD19PQ9H560 264 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 CNTD2Q9H8S5 307 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 GID8Q9NWU2 228 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 AURKCQ9UQB9 309 aa10.55□□□□□ -0.72
LINC00339-203ENST00000420503 TSPAN9O75954 239 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 COX4I1P13073 169 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 TPTEP56180 551 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
LINC00339-203ENST00000420503 FAM189A2Q15884 450 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 LY6EQ16553 131 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 TEX36Q5VZQ5 186 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 C8orf82Q6P1X6 216 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-203ENST00000420503 DNM1P34Q6PK57 102 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 GDPGP1Q6ZNW5 385 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 ZBTB46Q86UZ6 589 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 OR2AJ1Q8NGZ0 328 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 RORBQ92753 470 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 DHRS1Q96LJ7 313 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 IFT27Q9BW83 186 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 NDEL1Q9GZM8 345 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 ELL3Q9HB65 397 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-203ENST00000420503 SNTG1Q9NSN8 517 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 FAM96BQ9Y3D0 163 aa10.54□□□□□ -0.72
LINC00339-203ENST00000420503 NPFFO15130 113 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 RENP00797 406 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 OTX1P32242 354 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-203ENST00000420503 SAA4P35542 130 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 KPRPQ5T749 579 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-203ENST00000420503 PGM2L1Q6PCE3 622 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 CYP4Z1Q86W10 505 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 LINC00471Q8N535 108 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 OR9Q1Q8NGQ5 310 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 DDOQ99489 341 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 FGF23Q9GZV9 251 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-203ENST00000420503 WDR13Q9H1Z4 485 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 EGLN3Q9H6Z9 239 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 MRPL15Q9P015 296 aaKnown RBP10.53□□□□□ -0.72
LINC00339-203ENST00000420503 KAAG1Q9UBP8 84 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 KPTNQ9Y664 436 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 RYR3Q15413 4870 aa10.53□□□□□ -0.72
LINC00339-203ENST00000420503 DNAH3Q8TD57 4116 aa10.52□□□□□ -0.72
LINC00339-203ENST00000420503 A0A1B0GVI7 797 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 BHLHE40O14503 412 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 ARPC3O15145 178 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 GMDSO60547 372 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 DCTN3O75935 186 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 ALX3O95076 343 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 GYPBP06028 91 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 FBP1P09467 338 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 PRDX6P30041 224 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 SLC6A6P31641 620 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00339-203ENST00000420503 ECH1Q13011 328 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 KCNJ8Q15842 424 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 KLHL12Q53G59 568 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 HCP5Q6MZN7 132 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 WDR82Q6UXN9 313 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 DCXRQ7Z4W1 244 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 RNF148Q8N7C7 305 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 COPS4Q9BT78 406 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 ZNF319Q9P2F9 582 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 COMMD3-BMI1R4GMX3 469 aa10.52□□□□□ -0.73
LINC00339-203ENST00000420503 MEIOCA2RUB1 952 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 ANKRD61A6NGH8 418 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 H3BUX3 64 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 PIN1P1O15428 100 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 CHST1O43916 411 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 OPN1MWP04001 364 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 SPARCP09486 303 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 OPN1MW2P0DN77 364 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 OPN1MW3P0DN78 364 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 CLUP10909 449 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 RHCEP18577 417 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 GABRA5P31644 462 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 EFNB2P52799 333 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 SPIBQ01892 262 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 HERPUD1Q15011 391 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 DGUOKQ16854 277 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 SLC36A3Q495N2 470 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 HACD2Q6Y1H2 254 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 SLC16A9Q7RTY1 509 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 KLHDC1Q8N7A1 406 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 ZNF511Q8NB15 262 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 OR1M1Q8NGA1 313 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 OR8D4Q8NGM9 314 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
LINC00339-203ENST00000420503 CMTM5Q96DZ9 223 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 KCTD14Q9BQ13 255 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-203ENST00000420503 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 SLC22A4Q9H015 551 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 CENPMQ9NSP4 180 aa10.51□□□□□ -0.73
LINC00339-203ENST00000420503 PRPF19Q9UMS4 504 aaKnown RBP10.51□□□□□ -0.73
LINC00339-203ENST00000420503 ZNF281Q9Y2X9 895 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms