RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 GIPC3Q8TF64 312 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 ZNRF4Q8WWF5 429 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 RDH5Q92781 318 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 SLCO4A1Q96BD0 722 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 HIST1H2AAQ96QV6 131 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 DDOQ99489 341 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 COQ7Q99807 217 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 AIFM2Q9BRQ8 373 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 RBM4Q9BWF3 364 aaKnown RBP5.87□□□□□ -1.47
HMGN1-205ENST00000419378 HDHD2Q9H0R4 259 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 YY1AP1Q9H869 796 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 CHODLQ9H9P2 273 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF275Q9NSD4 429 aaPredicted RBP5.87□□□□□ -1.47
HMGN1-205ENST00000419378 MRPL22Q9NWU5 206 aaKnown RBP5.87□□□□□ -1.47
HMGN1-205ENST00000419378 NKIRAS2Q9NYR9 191 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 PDP1Q9P0J1 537 aaPredicted RBP5.87□□□□□ -1.47
HMGN1-205ENST00000419378 DNAJB9Q9UBS3 223 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 CYB5R1Q9UHQ9 305 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 KLHL21Q9UJP4 597 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 BAIAP2Q9UQB8 552 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 GRIP1Q9Y3R0 1128 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 YLPM1P49750 1951 aaKnown RBP5.87□□□□□ -1.47
HMGN1-205ENST00000419378 MALRD1Q5VYJ5 2156 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 LRP5LA4QPB2 252 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 TVP23AA6NH52 213 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 RIIAD1A6NNX1 92 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 ZAR1LA6NP61 321 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 A8MV72 311 aaPredicted RBP5.86□□□□□ -1.47
HMGN1-205ENST00000419378 H3BN98 237 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 SPRY3O43610 288 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 TIMM8AO60220 97 aaPredicted RBP5.86□□□□□ -1.47
HMGN1-205ENST00000419378 IFNGP01579 166 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 GYPBP06028 91 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 CHRM2P08172 466 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 CLUP10909 449 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 PSKH1P11801 424 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF3P17036 446 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 TUBG1P23258 451 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 COL8A2P25067 703 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 IL2RGP31785 369 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 GRK5P34947 590 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 LIPAP38571 399 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 GPR6P46095 362 aaPredicted RBP5.86□□□□□ -1.47
HMGN1-205ENST00000419378 RGS6P49758 472 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 RASSF2P50749 326 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF81P51508 661 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 SLC25A1P53007 311 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 CBX1P83916 185 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 PSG7Q13046 419 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 TSTQ16762 297 aaKnown RBP5.86□□□□□ -1.47
HMGN1-205ENST00000419378 KRTAP27-1Q3LI81 207 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 USP51Q70EK9 711 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 PAPD5Q8NDF8 572 aaKnown RBP5.86□□□□□ -1.47
HMGN1-205ENST00000419378 OR51L1Q8NGJ5 315 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 OR2AJ1Q8NGZ0 328 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 COG8Q96MW5 612 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 ATF6BQ99941 703 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 NMNAT2Q9BZQ4 307 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 SAP30LQ9HAJ7 183 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 PNRC2Q9NPJ4 139 aaKnown RBP5.86□□□□□ -1.47
HMGN1-205ENST00000419378 TUBG2Q9NRH3 451 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 CMC2Q9NRP2 79 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 CYSLTR2Q9NS75 346 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 DECR2Q9NUI1 292 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 PTTG3PQ9NZH4 202 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 KCNG2Q9UJ96 466 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 PURGQ9UJV8 347 aaKnown RBP5.86□□□□□ -1.47
HMGN1-205ENST00000419378 STARD10Q9Y365 291 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 COMMD3-BMI1R4GMX3 469 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 ATRQ13535 2644 aa5.86□□□□□ -1.47
HMGN1-205ENST00000419378 IGHV1-69-2A0A0G2JMI3 117 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 FAM183AA6NL82 134 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 PPIHO43447 177 aaKnown RBP5.85□□□□□ -1.47
HMGN1-205ENST00000419378 TIPRLO75663 272 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 ATP5HO75947 161 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 CD55P08174 381 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 ADH4P08319 380 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 SPARCP09486 303 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 ACSM4P0C7M7 580 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 ANXA8P13928 327 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF823P16415 610 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 SPI1P17947 270 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 KITLGP21583 273 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 PRKACGP22612 351 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 POU1F1P28069 291 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 RPS27P42677 84 aaKnown RBP5.85□□□□□ -1.47
HMGN1-205ENST00000419378 CRYBB2P43320 205 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 ECH1Q13011 328 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 RSPO1Q2MKA7 263 aaPredicted RBP5.85□□□□□ -1.47
HMGN1-205ENST00000419378 LINC01590Q5TEZ4 76 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 C1orf146Q5VVC0 180 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 SLC27A4Q6P1M0 643 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 SHQ1Q6PI26 577 aaKnown RBP5.85□□□□□ -1.47
HMGN1-205ENST00000419378 Q6ZR03 302 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 COLCA1Q6ZS62 124 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 PRIMA1Q86XR5 153 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 C11orf44Q8N8P7 122 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 OR10S1Q8NGN2 331 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 OR6K6Q8NGW6 343 aa5.85□□□□□ -1.47
HMGN1-205ENST00000419378 CLDND2Q8NHS1 167 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms