RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 RLN1P04808 185 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 TPOP07202 933 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 NAT2P11245 290 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 KLK2P20151 261 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 RAD52P43351 418 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 GMFBP60983 142 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 GUCA2AQ02747 115 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CNN3Q15417 329 aaKnown RBP12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 PHYHD1Q5SRE7 291 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 GLIPR1L1Q6UWM5 242 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CHMP1BQ7LBR1 199 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 ARRDC1Q8N5I2 433 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 BEST4Q8NFU0 473 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 TNFAIP8L1Q8WVP5 186 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 HAS2Q92819 552 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 GPER1Q99527 375 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 S100A13Q99584 98 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 FOXB1Q99853 325 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 LPAR5Q9H1C0 372 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 CRLF2Q9HC73 371 aa12.77□□□□□ -0.36
HLA-DPA1-242ENST00000419277 NCKAP5O14513 1909 aa12.77□□□□□ -0.37
HLA-DPA1-242ENST00000419277 BDP1A6H8Y1 2624 aa12.77□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SERPINE3A8MV23 424 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 F5H5K5 113 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 CDC14BO60729 498 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 HIST1H1DP16402 221 aaKnown RBP12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ABOP16442 354 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 NAT1P18440 290 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 PRKACBP22694 351 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 RRADP55042 308 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 GNG2P59768 71 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 KISS1Q15726 138 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 CDNFQ49AH0 187 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 HES3Q5TGS1 186 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 FAAP20Q6NZ36 180 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 FAM89BQ8N5H3 189 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ACBD4Q8NC06 268 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 OR1F12Q8NHA8 337 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 C1orf147Q96MC9 270 aaPredicted RBP12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SCGB3A2Q96PL1 93 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 KCNK15Q9H427 330 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 DEPPQ9NTK1 212 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 KLK13Q9UKR3 277 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 MCTS1Q9ULC4 181 aaKnown RBP12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 HMSDA8MTL9 139 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ZNF724A8MTY0 619 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 KLRC4-KLRK1H3BQV0 150 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ANXA7P20073 488 aaKnown RBP12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 CPT2P23786 658 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SOX8P57073 446 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 TAS2R31P59538 309 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 OR1C1Q15619 314 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 WIPI1Q5MNZ9 446 aaPredicted RBP12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 VAX1Q5SQQ9 334 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 DPPA2Q7Z7J5 298 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 FJX1Q86VR8 437 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 BPIFB2Q8N4F0 458 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 UXS1Q8NBZ7 420 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SEMA6DQ8NFY4 1073 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 RAB3CQ96E17 227 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 FBXO17Q96EF6 278 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SEC22CQ9BRL7 303 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 GP6Q9HCN6 339 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 PCDHB16Q9NRJ7 776 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ZNF319Q9P2F9 582 aa12.76□□□□□ -0.37
HLA-DPA1-242ENST00000419277 PCSK5Q92824 1860 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 TUBAL3A6NHL2 446 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 XRCC2O43543 280 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 GALR2O43603 387 aaPredicted RBP12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SYNGR4O95473 234 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ACTL6AO96019 429 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 IFNA7P01567 189 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 RFPL3SP0C7P2 107 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 COX5BP10606 129 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 SLC2A1P11166 492 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ZNF708P17019 499 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ITGA3P26006 1051 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 PTGFRP43088 359 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 RPS27AP62979 156 aaKnown RBP12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 FGL1Q08830 312 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 RNPS1Q15287 305 aaKnown RBP12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 MOGAT2Q3SYC2 334 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 CCDC157Q569K6 752 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 Q5BKY6 102 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 NLRC3Q7RTR2 1065 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 LRRC18Q8N456 261 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 CHST4Q8NCG5 386 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 OR2AK2Q8NG84 335 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 OR4D10Q8NGI6 311 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 TM2D1Q9BX74 207 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ZNF224Q9NZL3 707 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 BOLA1Q9Y3E2 137 aa12.75□□□□□ -0.37
HLA-DPA1-242ENST00000419277 CEACAM18A8MTB9 384 aa12.74□□□□□ -0.37
HLA-DPA1-242ENST00000419277 NME2P1O60361 137 aa12.74□□□□□ -0.37
HLA-DPA1-242ENST00000419277 MRPL33O75394 65 aaKnown RBP12.74□□□□□ -0.37
HLA-DPA1-242ENST00000419277 IFNA6P05013 189 aa12.74□□□□□ -0.37
HLA-DPA1-242ENST00000419277 ZNF735P0CB33 412 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms