RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 CDK3Q00526 305 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 SSBP1Q04837 148 aaKnown RBP12.38□□□□□ -0.43
LINC00887-202ENST00000414120 CTBP1Q13363 440 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 PMS2P11Q13670 270 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 CTXN3Q4LDR2 81 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 HECTD2Q5U5R9 776 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 TMEM205Q6UW68 189 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 PRSS45Q7RTY3 260 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 TGIF2LYQ8IUE0 185 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 MIB2Q96AX9 1013 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 VN1R3Q9BXE9 311 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 MTHFD2LQ9H903 347 aaPredicted RBP12.38□□□□□ -0.43
LINC00887-202ENST00000414120 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 ABI3Q9P2A4 366 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 ZNF319Q9P2F9 582 aa12.38□□□□□ -0.43
LINC00887-202ENST00000414120 A0A1B0GW15 77 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 EPOPA6NHQ4 379 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 ATXN7O15265 892 aaPredicted RBP12.37□□□□□ -0.43
LINC00887-202ENST00000414120 YPEL1O60688 119 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 ITGB2P05107 769 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 LMO1P25800 156 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 RAB38P57729 211 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 S100A10P60903 97 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 SPANXN4Q5MJ08 99 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 Q7L0L9 218 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 COMMD6Q7Z4G1 85 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 ACOT1Q86TX2 421 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 TCEANCQ8N8B7 351 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 ZNF417Q8TAU3 575 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 FER1L6-AS2Q96M78 137 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 YPEL2Q96QA6 119 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 NICN1Q9BSH3 213 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 FBRSQ9HAH7 460 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 CYP8B1Q9UNU6 501 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 CORO2BQ9UQ03 480 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 C5orf42Q9H799 3197 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 ANK1P16157 1881 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 PTPRSQ13332 1948 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 TBX6O95947 436 aaPredicted RBP12.37□□□□□ -0.43
LINC00887-202ENST00000414120 RAB40ALP0C0E4 278 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 OR8U9P0C7N5 309 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 ESDP10768 282 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 CYCSP99999 105 aaKnown RBP12.37□□□□□ -0.43
LINC00887-202ENST00000414120 RGNQ15493 299 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 MMDQ15546 238 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 PRTGQ2VWP7 1150 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 Q6ZRG5 221 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 PNKDQ8N490 385 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 RNF175Q8N4F7 328 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 RAB40AQ8WXH6 277 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 ZNF775Q96BV0 537 aaPredicted RBP12.37□□□□□ -0.43
LINC00887-202ENST00000414120 SLC25A38Q96DW6 304 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 SUSD3Q96L08 255 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 NSUN5Q96P11 429 aaKnown RBP12.37□□□□□ -0.43
LINC00887-202ENST00000414120 AQP10Q96PS8 301 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 VAMP8Q9BV40 100 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 SLC39A8Q9C0K1 460 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 SLC5A7Q9GZV3 580 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 RAB1BQ9H0U4 201 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 RDH14Q9HBH5 336 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 KCNK6Q9Y257 313 aa12.37□□□□□ -0.43
LINC00887-202ENST00000414120 IGHV1-69-2A0A0G2JMI3 117 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 A0A1W2PRS3 328 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 PCDH7O60245 1069 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 FCMRO60667 390 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 GPANK1O95872 356 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 LINC00271P0C7V0 271 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 ALPPL2P10696 532 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 ATP1B3P54709 279 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 UBE2NP61088 152 aaKnown RBP12.36□□□□□ -0.43
LINC00887-202ENST00000414120 PTSQ03393 145 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 OR7A5Q15622 319 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 TMEM176BQ3YBM2 270 aaPredicted RBP12.36□□□□□ -0.43
LINC00887-202ENST00000414120 C1orf189Q5VU69 101 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 OR5AK3PQ8NH89 298 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 GNRHR2Q96P88 292 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 HIST1H2AAQ96QV6 131 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 IL36AQ9UHA7 158 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 FUT9Q9Y231 359 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 ARL5AQ9Y689 179 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 ZNF705FA8MVS1 300 aaPredicted RBP12.36□□□□□ -0.43
LINC00887-202ENST00000414120 RAB27BO00194 218 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 RNASET2O00584 256 aaKnown RBP12.36□□□□□ -0.43
LINC00887-202ENST00000414120 CD160O95971 181 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 IGHA1P01876 353 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 ZNF705DP0CH99 300 aaPredicted RBP12.36□□□□□ -0.43
LINC00887-202ENST00000414120 ZNF705BP0CI00 300 aaPredicted RBP12.36□□□□□ -0.43
LINC00887-202ENST00000414120 OR1D2P34982 312 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 UCP3P55916 312 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 TBPL1P62380 186 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 VAMP3Q15836 100 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 PGGHGQ32M88 737 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 ACOT6Q3I5F7 207 aaPredicted RBP12.36□□□□□ -0.43
LINC00887-202ENST00000414120 CCSMST1Q4G0I0 132 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 WFDC8Q8IUA0 241 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 TOP6BLQ8N6T0 577 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 SUMF2Q8NBJ7 301 aa12.36□□□□□ -0.43
LINC00887-202ENST00000414120 RLN3Q8WXF3 142 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms