RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZSCAN5BA6NJL1 495 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 CLPXO76031 633 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 GLCEO94923 617 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 CLUP10909 449 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 ZNF16P17020 682 aaPredicted RBP12.38□□□□□ -0.43
SEC13-208ENST00000397109 ZNF182P17025 639 aaPredicted RBP12.38□□□□□ -0.43
SEC13-208ENST00000397109 TNFSF4P23510 183 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 BDH1Q02338 343 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 HFEQ30201 348 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 CHRFAM7AQ494W8 412 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 TMEM255AQ5JRV8 349 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 FBXW12Q6X9E4 464 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 CFAP77Q6ZQR2 320 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 USP43Q70EL4 1123 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 CROCCP3Q8IVE0 287 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 BBS1Q8NFJ9 593 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 OR52N1Q8NH53 320 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 ZNRF4Q8WWF5 429 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 GTF3AQ92664 365 aaKnown RBP12.38□□□□□ -0.43
SEC13-208ENST00000397109 DCUN1D5Q9BTE7 237 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 POFUT1Q9H488 388 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 MED20Q9H944 212 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 MARCH7Q9H992 704 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 LPAR3Q9UBY5 353 aa12.38□□□□□ -0.43
SEC13-208ENST00000397109 J3QRE1 110 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 CDC14BO60729 498 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 TGFAP01135 160 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 GYPBP06028 91 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 CD55P08174 381 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 CPEP16870 476 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 ATP6V1E1P36543 226 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 TPTEP56180 551 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 SLC3A1Q07837 685 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 DBPQ10586 325 aaPredicted RBP12.37□□□□□ -0.43
SEC13-208ENST00000397109 GPR50Q13585 617 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 SPCS2Q15005 226 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
SEC13-208ENST00000397109 KRTAP27-1Q3LI81 207 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 BCDIN3DQ7Z5W3 292 aaKnown RBP12.37□□□□□ -0.43
SEC13-208ENST00000397109 LINC01356Q8N9X3 169 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 TIMD4Q96H15 378 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 C1orf159Q96HA4 380 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 OR5M11Q96RB7 305 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 TEAD3Q99594 435 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 C1QTNF5Q9BXJ0 243 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 MSL2Q9HCI7 577 aa12.37□□□□□ -0.43
SEC13-208ENST00000397109 CAB39Q9Y376 341 aaPredicted RBP12.37□□□□□ -0.43
SEC13-208ENST00000397109 ANK3Q12955 4377 aaKnown RBP12.37□□□□□ -0.43
SEC13-208ENST00000397109 CCDC182A6NF36 153 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 TVP23AA6NH52 213 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 CLDN25C9JDP6 229 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 F5H5K5 113 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 ACSM4P0C7M7 580 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 HSMCR30P0CW71 290 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 ENTPD1P49961 510 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 ACTC1P68032 377 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 ACTA1P68133 377 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 TPBGQ13641 420 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 PCK2Q16822 640 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 TEX30Q5JUR7 227 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 TMPRSS11AQ6ZMR5 421 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 KLHL36Q8N4N3 616 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 ACBD7Q8N6N7 88 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 OR51L1Q8NGJ5 315 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 DYNC2LI1Q8TCX1 351 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 SPTSSAQ969W0 71 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 OPALINQ96PE5 141 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 OR51V1Q9H2C8 321 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 PNRC2Q9NPJ4 139 aaKnown RBP12.36□□□□□ -0.43
SEC13-208ENST00000397109 PTTG3PQ9NZH4 202 aa12.36□□□□□ -0.43
SEC13-208ENST00000397109 IFNA2P01563 188 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 SELEP16581 610 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 TNFRSF1AP19438 455 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 GALP22466 123 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 ETV1P50549 477 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 TNFAIP6P98066 277 aaPredicted RBP12.35□□□□□ -0.43
SEC13-208ENST00000397109 MALLQ13021 153 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 DCTN2Q13561 401 aaKnown RBP12.35□□□□□ -0.43
SEC13-208ENST00000397109 ZNF829Q3KNS6 432 aaPredicted RBP12.35□□□□□ -0.43
SEC13-208ENST00000397109 LCN1P1Q5VSP4 162 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 OR6K6Q8NGW6 343 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 CLDND2Q8NHS1 167 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 TBC1D15Q8TC07 691 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 S100ZQ8WXG8 99 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 CCL17Q92583 94 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 RAB1CQ92928 201 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 OTULINQ96BN8 352 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 MAP6Q96JE9 813 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 BEX2Q9BXY8 128 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 SHARPINQ9H0F6 387 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 PLGRKTQ9HBL7 147 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 DDX28Q9NUL7 540 aaKnown RBP12.35□□□□□ -0.43
SEC13-208ENST00000397109 NDUFB11Q9NX14 153 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 CLEC2DQ9UHP7 191 aa12.35□□□□□ -0.43
SEC13-208ENST00000397109 B4DSR2 109 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 M0R135 149 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 ZNF593O00488 134 aaPredicted RBP12.34□□□□□ -0.43
SEC13-208ENST00000397109 LCATP04180 440 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 SPARCP09486 303 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms