RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 FUT7Q11130 342 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF385BQ569K4 471 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CTRB2Q6GPI1 263 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 DEGS2Q6QHC5 323 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM182Q6ZP80 229 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 DYNC2LI1Q8TCX1 351 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SLC39A7Q92504 469 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ERGIC1Q969X5 290 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 C8orf44Q96CB5 159 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 EDEM2Q9BV94 578 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ISG20L2Q9H9L3 353 aaKnown RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 MTCH1Q9NZJ7 389 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 PLPP2O43688 288 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TSPAN12O95859 305 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 SMIM18P0DKX4 95 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 LYG2Q86SG7 212 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 CDH26Q8IXH8 852 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 BPIFCQ8NFQ6 507 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OR4Q3Q8NH05 313 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 CLDN23Q96B33 292 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 BRWD1Q9NSI6 2320 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 ZC3H12DA2A288 527 aaKnown RBP4.92□□□□□ -1.62
VPS13C-204ENST00000395898 UMAD1C9J7I0 102 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 H3F3AP84243 136 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 LHX8Q68G74 356 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM229BQ8NBD8 167 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 A0A096LPE4 126 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 A0A1W2PPZ6 126 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 HRO43593 1189 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 ELLP55199 621 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-204ENST00000395898 FAM122CQ6P4D5 195 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OR4F5Q8NH21 305 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OTOSQ8NHW6 89 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 PPP1R1CQ8WVI7 109 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 PELI1Q96FA3 418 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OR4F4Q96R69 305 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF251Q9BRH9 671 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 ESRP2Q9H6T0 727 aaKnown RBP4.92□□□□□ -1.62
VPS13C-204ENST00000395898 IGHV3-15A0A0B4J1V0 119 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM235A6NFC5 223 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 FAM157BP0CG42 384 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 SMIM17P0DL12 118 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OR13C7P0DN81 318 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 CDC20Q12834 499 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 PLA1AQ53H76 456 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TMPRSS11FQ6ZWK6 438 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 RHOUQ7L0Q8 258 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 CCDC71Q8IV32 467 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OR10AD1Q8NGE0 317 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 CHST6Q9GZX3 395 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 PSENENQ9NZ42 101 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TAAR3PQ9P1P4 343 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TRGV5A0A0B4J1U4 118 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TUBAL3A6NHL2 446 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 SIRPB1O00241 398 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 SLC17A2O00624 439 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 C19orf35Q6ZS72 473 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 SSX9Q7RTT3 188 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM99Q8N816 258 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 FAM122AQ96E09 287 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 MED29Q9NX70 200 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 ADAMTSL1Q8N6G6 1762 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 IGLV3-16A0A075B6K0 115 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF727A8MUV8 499 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 C2CD4DB7Z1M9 353 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 GPX5O75715 221 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 RAB5AP20339 215 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 PAX6P26367 422 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OPRM1P35372 400 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 GFERP55789 205 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 PPP2CBP62714 309 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 PPP2CAP67775 309 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 KHDC1LQ5JSQ8 128 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM268Q5VZI3 342 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TRAT1Q6PIZ9 186 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 SH2D5Q6ZV89 423 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 CNRIP1Q96F85 164 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-204ENST00000395898 B9D1Q9UPM9 204 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 KIF26BQ2KJY2 2108 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 HEATR1Q9H583 2144 aaKnown RBP4.92□□□□□ -1.62
VPS13C-204ENST00000395898 LRP3O75074 770 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 PIAS2O75928 621 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 HRASP01112 189 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 FBP1P09467 338 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 MDH2P40926 338 aaKnown RBP4.92□□□□□ -1.62
VPS13C-204ENST00000395898 MYBPHQ13203 477 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 C9orf152Q5JTZ5 239 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 UBAC2Q8NBM4 344 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF784Q8NCA9 323 aaPredicted RBP4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OR2T6Q8NHC8 308 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 FOXQ1Q9C009 403 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 CTDSP1Q9GZU7 261 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 LTB4R2Q9NPC1 389 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 OR6C68A6NDL8 312 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 NME2P1O60361 137 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 DHRS3O75911 302 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 SIX6O95475 246 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 CLEC2LP0C7M8 214 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 RPA2P15927 270 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 GABRB1P18505 474 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms