RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 DPPA2Q7Z7J5 298 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 OR13D1Q8NGV5 346 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 PHOSPHO2Q8TCD6 241 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 LIPHQ8WWY8 451 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 FGF13Q92913 245 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 FGF11Q92914 225 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 VSTM2LQ96N03 204 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 V9GYS6 101 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 TNS1Q9HBL0 1735 aaKnown RBP7.72□□□□□ -1.17
GABRA1-202ENST00000393943 A0A1W2PPC1 479 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 A0A1W2PQD3 144 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 TLCD2A6NGC4 264 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 A8MXE2 369 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 CLDN34H7C241 214 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 MT-CO2P00403 227 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 PGA3P0DJD8 388 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 SULT1A1P50225 295 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 ADPRHP54922 357 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 RANP62826 216 aaKnown RBP7.72□□□□□ -1.17
GABRA1-202ENST00000393943 DUSP2Q05923 314 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 MSMO1Q15800 293 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 PCK2Q16822 640 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 HYAL4Q2M3T9 481 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 NSUN5P2Q63ZY6 315 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 RPL7L1Q6DKI1 246 aaKnown RBP7.72□□□□□ -1.17
GABRA1-202ENST00000393943 OR2T2Q6IF00 324 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 DPPA3Q6W0C5 159 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 COMTD1Q86VU5 262 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 DEFB126Q9BYW3 111 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 PLEK2Q9NYT0 353 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 EIF1BO60739 113 aaKnown RBP7.72□□□□□ -1.17
GABRA1-202ENST00000393943 ISG15P05161 165 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 OR5H8P0DN80 308 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 AADACP22760 399 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 CCR2P41597 374 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 MFAP5Q13361 173 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 MESTQ5EB52 335 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 HOGA1Q86XE5 327 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 FAM24BQ8N5W8 94 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 C10orf35Q96D05 121 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 TECTBQ96PL2 329 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 TLNRD1Q9H1K6 362 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 C6orf106Q9H6K1 298 aaPredicted RBP7.72□□□□□ -1.17
GABRA1-202ENST00000393943 TMEM184BQ9Y519 407 aaPredicted RBP7.72□□□□□ -1.17
GABRA1-202ENST00000393943 PCM1Q15154 2024 aa7.72□□□□□ -1.17
GABRA1-202ENST00000393943 PTPRDP23468 1912 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 CXorf65A6NEN9 183 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 F5H5K5 113 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 FGF16O43320 207 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 EIF3GO75821 320 aaKnown RBP eCLIP7.71□□□□□ -1.17
GABRA1-202ENST00000393943 MUC1P15941 1255 aaPredicted RBP7.71□□□□□ -1.17
GABRA1-202ENST00000393943 MMP16P51512 607 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 NOVA1P51513 510 aaKnown RBP7.71□□□□□ -1.17
GABRA1-202ENST00000393943 RPS11P62280 158 aaKnown RBP eCLIP7.71□□□□□ -1.17
GABRA1-202ENST00000393943 RPP30P78346 268 aaKnown RBP7.71□□□□□ -1.17
GABRA1-202ENST00000393943 PSG6Q00889 435 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 COL19A1Q14993 1142 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 OR51E1Q8TCB6 317 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 SECTM1Q8WVN6 248 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 RTN4IP1Q8WWV3 396 aaPredicted RBP7.71□□□□□ -1.17
GABRA1-202ENST00000393943 KTI12Q96EK9 354 aaPredicted RBP7.71□□□□□ -1.17
GABRA1-202ENST00000393943 ASB16Q96NS5 453 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 FBXO34Q9NWN3 711 aa7.71□□□□□ -1.17
GABRA1-202ENST00000393943 VAMP5O95183 116 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 METTL15P1P0C7V9 234 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 TMIGD3P0DMS9 266 aaPredicted RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 HOXB3P14651 431 aaPredicted RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 SNCAP37840 140 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 NPBWR1P48145 328 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 PSMB3P49720 205 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 HNRNPKP61978 463 aaKnown RBP eCLIP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 ACOT6Q3I5F7 207 aaPredicted RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 ZNF429Q86V71 674 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 GPR137CQ8N3F9 429 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 UBAC2Q8NBM4 344 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 AQP3Q92482 292 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 ANKRD9Q96BM1 317 aaPredicted RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 CABLES2Q9BTV7 478 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 PCOLCE2Q9UKZ9 415 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 ZNF705FA8MVS1 300 aaPredicted RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 CYB5BO43169 146 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 ALOX12BO75342 701 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 NTN1O95631 604 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 PTBP3O95758 552 aaKnown RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 OPN1MWP04001 364 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 ZNF705DP0CH99 300 aaPredicted RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 ZNF705BP0CI00 300 aaPredicted RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 OPN1MW2P0DN77 364 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 OPN1MW3P0DN78 364 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 RBP2P50120 134 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 SUCLG1P53597 346 aaKnown RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 TMEM33P57088 247 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 ETFBKMTQ8IXQ9 262 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 PINX1Q96BK5 328 aaKnown RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 TM4SF19Q96DZ7 209 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 WDR77Q9BQA1 342 aaPredicted RBP7.71□□□□□ -1.18
GABRA1-202ENST00000393943 BANF2Q9H503 90 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 CNTD2Q9H8S5 307 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 CREBZFQ9NS37 354 aa7.71□□□□□ -1.18
GABRA1-202ENST00000393943 PARPBPQ9NWS1 579 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms