RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 OR51A2Q8NGJ7 313 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 M1APQ8TC57 530 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 WDR92Q96MX6 357 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 ELOVL3Q9HB03 270 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 PRODH2Q9UF12 536 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 GPR132Q9UNW8 380 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 DHDHQ9UQ10 334 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 SDK1Q7Z5N4 2213 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF264O43296 627 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF708P17019 499 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 TBPP20226 339 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 FCGR2CP31995 323 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 SOHLH1Q5JUK2 328 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 RPUSD3Q6P087 351 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 OPN5Q6U736 354 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF550Q7Z398 422 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 C5orf24Q7Z6I8 188 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 KDM8Q8N371 416 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 CSNK1A1LQ8N752 337 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 JSRP1Q96MG2 331 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 PNPP00491 289 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 CPMP14384 443 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 CHATP28329 748 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 FHITP49789 147 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 TMEM33P57088 247 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 ID2Q02363 134 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 ADAMTSL4Q6UY14 1074 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 FOXRED2Q8IWF2 684 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 CHST4Q8NCG5 386 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 OR13C9Q8NGT0 318 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 NOL4LQ96MY1 436 aaPredicted RBP13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 TMEM14AQ9Y6G1 99 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 TRBV23OR9-2A0A075B6M9 112 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 PHOX2AO14813 284 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 RAB28P51157 221 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 ADPRHP54922 357 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 SLC17A1Q14916 467 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 C1orf100Q5SVJ3 147 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF679Q8IYX0 411 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 RAB42Q8N4Z0 105 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 JAGN1Q8N5M9 183 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 OR9A4Q8NGU2 314 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 PACRGQ96M98 296 aaPredicted RBP13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 ATG101Q9BSB4 218 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 SMIM3Q9BZL3 60 aa13.05□□□□□ -0.32
VPS9D1-201ENST00000389386 H7C1C5 153 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 K7EPK0 472 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 SYT7O43581 403 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF217O75362 1048 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 TRGC2P03986 189 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 APODP05090 189 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 NPY4RP50391 375 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 LCN6P62502 163 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 SPOCK1Q08629 439 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 OR2T2Q6IF00 324 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 NPSR1Q6W5P4 371 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 FAM71E2Q8N5Q1 922 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 DTWD2Q8NBA8 298 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 MFSD9Q8NBP5 474 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 TMEM104Q8NE00 496 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 OR4D6Q8NGJ1 314 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 PBDC1Q9BVG4 233 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 CRLF2Q9HC73 371 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 VSX1Q9NZR4 365 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 LUZP4Q9P127 313 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 RAB22AQ9UL26 194 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 SLCO1B1Q9Y6L6 691 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 COLEC10Q9Y6Z7 277 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 ARHGEF17Q96PE2 2063 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 CCDC187A0A096LP49 1063 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 A0A1W2PQU0 124 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 CEACAM18A8MTB9 384 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 MASP2O00187 686 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 SOX1O00570 391 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 EREGO14944 169 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 FSTP19883 344 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 CAMLGP49069 296 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 ERVFRD-1P60508 538 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 FCRL6Q6DN72 434 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 POMZP3Q6PJE2 187 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 RD3Q7Z3Z2 195 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF101Q8IZC7 436 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 LRRC18Q8N456 261 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 LRRC75AQ8NAA5 344 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 OR4K15Q8NH41 348 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 ABHD5Q8WTS1 349 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 HPSE2Q8WWQ2 592 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 SLC25A44Q96H78 314 aaPredicted RBP13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 INTS14Q96SY0 518 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 C19orf12Q9NSK7 152 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 MUC3AQ02505 3323 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 MEGF11A6BM72 1044 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 FAM221BA6H8Z2 402 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 MARCH11A6NNE9 402 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 C9J4A7 227 aa13.04□□□□□ -0.32
VPS9D1-201ENST00000389386 PI3P19957 117 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms