RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SPTSSAQ969W0 71 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 WDR89Q96FK6 387 aaPredicted RBP17.76■□□□□ 0.43
VSX1-202ENST00000376709 CITED4Q96RK1 184 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 CDC6Q99741 560 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 NICN1Q9BSH3 213 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 IFT46Q9NQC8 304 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 PINLYPA6NC86 204 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 DISC1C4P0D8 188 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 OR2A4O95047 310 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 DBHP09172 617 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 CD163Q86VB7 1156 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 GVQW1Q8N7I0 195 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 PNLDC1Q8NA58 520 aaKnown RBP17.76■□□□□ 0.43
VSX1-202ENST00000376709 ZNF680Q8NEM1 530 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 RADILQ96JH8 1075 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 OR2A7Q96R45 310 aa17.76■□□□□ 0.43
VSX1-202ENST00000376709 BOKQ9UMX3 212 aaPredicted RBP17.76■□□□□ 0.43
VSX1-202ENST00000376709 KMT2EQ8IZD2 1858 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 IGKV1-9A0A0C4DH69 117 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 ZNF716A6NP11 495 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 DHRS3O75911 302 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 ZNF735P0CB33 412 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 CNR1P21554 472 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 OTX1P32242 354 aaPredicted RBP17.75■□□□□ 0.43
VSX1-202ENST00000376709 ECH1Q13011 328 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 HES3Q5TGS1 186 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 AAED1Q7RTV5 226 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 GPR137CQ8N3F9 429 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 OR2AK2Q8NG84 335 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 NPRL2Q8WTW4 380 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 ALKBH3Q96Q83 286 aaPredicted RBP17.75■□□□□ 0.43
VSX1-202ENST00000376709 SLC6A7Q99884 636 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 NUDT16L1Q9BRJ7 211 aaKnown RBP17.75■□□□□ 0.43
VSX1-202ENST00000376709 TMEM59Q9BXS4 323 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 GPR87Q9BY21 358 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 ALX4Q9H161 411 aaPredicted RBP17.75■□□□□ 0.43
VSX1-202ENST00000376709 LPAR5Q9H1C0 372 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 CLEC4MQ9H2X3 399 aaPredicted RBP17.75■□□□□ 0.43
VSX1-202ENST00000376709 CACNA1HO95180 2353 aa17.75■□□□□ 0.43
VSX1-202ENST00000376709 GOSR2O14653 212 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 GALR2O43603 387 aaPredicted RBP17.74■□□□□ 0.43
VSX1-202ENST00000376709 CDC14BO60729 498 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 IGLV3-1P01715 115 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 CHRM2P08172 466 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 NTF4P34130 210 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 RSPO1Q2MKA7 263 aaPredicted RBP17.74■□□□□ 0.43
VSX1-202ENST00000376709 OR52W1Q6IF63 320 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 C11orf88Q6PI97 169 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 DPCDQ9BVM2 203 aaPredicted RBP17.74■□□□□ 0.43
VSX1-202ENST00000376709 BANF2Q9H503 90 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 MRPS18CQ9Y3D5 142 aaKnown RBP17.74■□□□□ 0.43
VSX1-202ENST00000376709 CRTAPO75718 401 aaPredicted RBP17.74■□□□□ 0.43
VSX1-202ENST00000376709 SIX6O95475 246 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 MPC2O95563 127 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 OR4E1P0C645 316 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 FAHP16930 419 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 THBS4P35443 961 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 CD96P40200 585 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 ABHD17BQ5VST6 288 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 ADGRG7Q96K78 797 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 C1orf147Q96MC9 270 aaPredicted RBP17.74■□□□□ 0.43
VSX1-202ENST00000376709 PRRT1Q99946 306 aa17.74■□□□□ 0.43
VSX1-202ENST00000376709 C21orf140B9A014 251 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 SGCEO43556 437 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 MTRF1O75570 445 aaKnown RBP17.73■□□□□ 0.43
VSX1-202ENST00000376709 CASRP41180 1078 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 H2BFSP57053 126 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 CXADRP78310 365 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 KISS1Q15726 138 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 SLC22A6Q4U2R8 563 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 OR5D18Q8NGL1 313 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 PIGLQ9Y2B2 252 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 PLEKHA6Q9Y2H5 1048 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 V9GYS6 101 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 UBBP0CG47 229 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 FOXO1Q12778 655 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 C2orf68Q2NKX9 166 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 ABLIM2Q6H8Q1 611 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 JMJD6Q6NYC1 403 aaPredicted RBP17.73■□□□□ 0.43
VSX1-202ENST00000376709 PP6455Q8WZ26 134 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 RAB3CQ96E17 227 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 TMEM38BQ9NVV0 291 aa17.73■□□□□ 0.43
VSX1-202ENST00000376709 LOC100509620A0A075B734 347 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 A0A0A6YYD4 124 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 A0A1W2PP11 408 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 SLC22A5O76082 557 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 ZNF35P13682 527 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 B4GALT1P15291 398 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 GFRA1P56159 465 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 CLDN15P56746 228 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 RAB35Q15286 201 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 FAM189A2Q15884 450 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 ATPAF1Q5TC12 328 aaPredicted RBP17.72■□□□□ 0.43
VSX1-202ENST00000376709 THOC7Q6I9Y2 204 aaKnown RBP17.72■□□□□ 0.43
VSX1-202ENST00000376709 RTN4RL2Q86UN3 420 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 OR8H3Q8N146 312 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 FAM109AQ8N4B1 249 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 OR13C8Q8NGS7 320 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 CPT1CQ8TCG5 803 aa17.72■□□□□ 0.43
VSX1-202ENST00000376709 SSC4DQ8WTU2 575 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms